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PGPEP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:28.4 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Pig:4.6 nTPM
Mouse:10.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035368
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
1855 Male, age 76, left hemisphere 35.7
2621 Female, age 67, right hemisphere 31.7
1911 Female, age 85, right hemisphere 31.5
2148 Female, age 91, left hemisphere 31.5
1898 Male, age 80, left hemisphere 28.5
2529 Female, age 94, left hemisphere 27.1
Dentate gyrus
nTPM: 31.0
2531 Female, age 67, both hemispheres 34.3
2530 Female, age 94, left hemisphere 32.2
1927 Female, age 91, both hemispheres 30.8
2246 Female, age 85, both hemispheres 30.8
2010 Male, age 76, both hemispheres 30.2
2528 Male, age 74, both hemispheres 27.5
Entorhinal gyrus
nTPM: 26.3
2686 Male, age 75, right hemisphere 29.0
2117 Female, age 91, right hemisphere 28.2
1787 Male, age 76, left hemisphere 25.9
2613 Female, age 94, left hemisphere 25.5
1938 Female, age 85, left hemisphere 24.9
2764 Male, age 80, right hemisphere 23.9
Hippocampus, CA1
nTPM: 30.3
1873 Female, age 85, both hemispheres 33.7
2749 Male, age 80, left hemisphere 31.2
2045 Male, age 76, both hemispheres 31.0
2082 Female, age 91, right hemisphere 29.2
2527 Male, age 74, both hemispheres 26.4
Hippocampus, CA2
nTPM: 29.4
1963 Male, age 80, left hemisphere 33.2
2437 Female, age 94, left hemisphere 31.0
1892 Male, age 76, both hemispheres 29.8
2113 Female, age 91, right hemisphere 28.5
1940 Female, age 85, left hemisphere 27.9
2249 Male, age 74, both hemispheres 26.2
Hippocampus, CA3
nTPM: 30.9
2861 Female, age 67, both hemispheres 33.7
2620 Female, age 94, left hemisphere 33.1
2137 Male, age 80, left hemisphere 31.0
1867 Male, age 76, both hemispheres 29.8
1891 Female, age 85, both hemispheres 29.1
2436 Male, age 74, both hemispheres 28.8
Parahippocampal cortex
nTPM: 25.4
2018 Male, age 76, both hemispheres 30.9
2250 Female, age 67, right hemisphere 26.7
2692 Male, age 74, both hemispheres 26.4
2245 Female, age 91, both hemispheres 26.0
2622 Female, age 67, right hemisphere 26.0
1990 Female, age 91, right hemisphere 24.6
2532 Female, age 72, left hemisphere 23.9
2693 Female, age 94, both hemispheres 23.4
1933 Female, age 85, both hemispheres 23.3
1850 Male, age 80, both hemispheres 23.1
Perirhinal gyrus
nTPM: 24.0
1847 Female, age 91, left hemisphere 25.6
2521 Female, age 94, right hemisphere 24.8
1794 Male, age 80, right hemisphere 23.6
2848 Male, age 76, right hemisphere 23.1
1841 Female, age 85, right hemisphere 22.8
Subiculum
nTPM: 28.6
2042 Male, age 76, both hemispheres 31.3
2729 Female, age 91, right hemisphere 30.0
2438 Female, age 94, left hemisphere 29.4
1901 Male, age 80, both hemispheres 27.7
1977 Female, age 85, both hemispheres 27.4
2619 Male, age 74, both hemispheres 25.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 95.2
Min nTPM: 10.2
Std nTPM: 11.5
Median nTPM: 26.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 95.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 65.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 61.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 57.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 53.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 52.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 52.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 51.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 49.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 49.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 48.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10153-102I9 76 years, female 43.7
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.5
Sample A Female 4.6
Sample B Female 3.8
Sample C Male 4.3
Sample D Male 3.5
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 4.6
Min nTPM: 4.2
Sample A Female 4.4
Sample B Female 4.5
Sample C Male 4.6
Sample D Male 4.2
Subiculum
nTPM: 4.6
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.3
Sample A Female 4.5
Sample B Female 4.3
Sample C Male 4.4
Sample D Male 5.1
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.9
Sample A Female 4.2
Sample B Female 3.9
Sample C Male 5.3
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 4.1
Sample A Male 7.6
Sample B Male 4.1
Sample C Female 10.6
Sample D Female 5.4
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 11.3
Min nTPM: 10.0
Sample A Male 11.3
Sample B Male 10.4
Sample C Female 10.5
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68799095 Antisense, RP_050217_02_A07, Mouse strain C57BL/6J (56 days, male) 0.7

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