ABOUTMENU
HELP
NEWS
HIGD1B
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:68.8 nTPM
HPA:68.8 nTPM
GTEx:34.9 nTPM
FANTOM5:8.0 Scaled Tags Per Million
Pig:1.0 nTPM
Mouse:7.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.8
Sample id Sample description nTPM
Hippocampus
nTPM: 68.6
1911 Female, age 85, right hemisphere 69.1
2621 Female, age 67, right hemisphere 69.1
2529 Female, age 94, left hemisphere 68.7
1855 Male, age 76, left hemisphere 68.6
1898 Male, age 80, left hemisphere 68.6
2148 Female, age 91, left hemisphere 67.6
Dentate gyrus
nTPM: 68.0
2530 Female, age 94, left hemisphere 68.9
2010 Male, age 76, both hemispheres 68.5
2531 Female, age 67, both hemispheres 67.9
2528 Male, age 74, both hemispheres 67.8
1927 Female, age 91, both hemispheres 67.4
2246 Female, age 85, both hemispheres 67.4
Entorhinal gyrus
nTPM: 68.4
2686 Male, age 75, right hemisphere 70.7
1787 Male, age 76, left hemisphere 69.1
2764 Male, age 80, right hemisphere 67.9
1938 Female, age 85, left hemisphere 67.8
2117 Female, age 91, right hemisphere 67.5
2613 Female, age 94, left hemisphere 67.3
Hippocampus, CA1
nTPM: 67.8
2527 Male, age 74, both hemispheres 68.7
2045 Male, age 76, both hemispheres 67.7
2082 Female, age 91, right hemisphere 67.7
1873 Female, age 85, both hemispheres 67.6
2749 Male, age 80, left hemisphere 67.5
Hippocampus, CA2
nTPM: 68.5
1963 Male, age 80, left hemisphere 71.1
2249 Male, age 74, both hemispheres 68.2
1892 Male, age 76, both hemispheres 68.1
2437 Female, age 94, left hemisphere 67.9
1940 Female, age 85, left hemisphere 67.8
2113 Female, age 91, right hemisphere 67.8
Hippocampus, CA3
nTPM: 68.8
2861 Female, age 67, both hemispheres 70.4
1867 Male, age 76, both hemispheres 69.6
1891 Female, age 85, both hemispheres 69.0
2620 Female, age 94, left hemisphere 68.5
2137 Male, age 80, left hemisphere 68.4
2436 Male, age 74, both hemispheres 66.6
Parahippocampal cortex
nTPM: 68.2
2018 Male, age 76, both hemispheres 70.2
2622 Female, age 67, right hemisphere 69.1
2532 Female, age 72, left hemisphere 68.6
2250 Female, age 67, right hemisphere 68.5
1933 Female, age 85, both hemispheres 68.0
2692 Male, age 74, both hemispheres 68.0
2245 Female, age 91, both hemispheres 67.8
1850 Male, age 80, both hemispheres 67.5
2693 Female, age 94, both hemispheres 67.1
1990 Female, age 91, right hemisphere 67.0
Perirhinal gyrus
nTPM: 67.3
2848 Male, age 76, right hemisphere 67.9
1841 Female, age 85, right hemisphere 67.7
1794 Male, age 80, right hemisphere 67.2
2521 Female, age 94, right hemisphere 67.0
1847 Female, age 91, left hemisphere 66.9
Subiculum
nTPM: 67.9
2042 Male, age 76, both hemispheres 68.7
2619 Male, age 74, both hemispheres 68.3
1901 Male, age 80, both hemispheres 68.2
2438 Female, age 94, left hemisphere 67.8
1977 Female, age 85, both hemispheres 67.3
2729 Female, age 91, right hemisphere 67.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 128.4
Min nTPM: 2.1
Std nTPM: 20.9
Median nTPM: 29.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 128.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 110.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 102.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 88.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 85.0
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 84.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 83.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 82.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 81.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 79.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 72.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.0
FF:10153-102I9 76 years, female 14.0
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A Female 0.7
Sample B Female 0.6
Sample C Male 0.8
Sample D Male 0.4
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.8
Sample A Female 1.0
Sample B Female 1.3
Sample C Male 1.0
Sample D Male 0.8
Subiculum
nTPM: 0.7
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.5
Sample A Female 0.9
Sample B Female 0.5
Sample C Male 0.8
Sample D Male 0.7
Ventral hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.6
Sample A Female 0.7
Sample B Female 0.6
Sample C Male 0.6
Sample D Male 0.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.0
Sample A Male 7.8
Sample B Male 6.0
Sample C Female 7.7
Sample D Female 8.1
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.1
Sample A Male 8.6
Sample B Male 6.1
Sample C Female 6.9
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71616335 Antisense, RP_050927_02_F10, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.