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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:46.9 nTPM
HPA:46.9 nTPM
GTEx:96.5 nTPM
FANTOM5:86.0 Scaled Tags Per Million
Pig:51.2 nTPM
Mouse:13.5 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042596Antibody HPA048072
Glial cells Not detectedMedium
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
1898 Male, age 80, left hemisphere 47.9
2621 Female, age 67, right hemisphere 44.8
1855 Male, age 76, left hemisphere 42.8
2529 Female, age 94, left hemisphere 42.2
1911 Female, age 85, right hemisphere 40.6
2148 Female, age 91, left hemisphere 39.1
Dentate gyrus
nTPM: 42.5
2530 Female, age 94, left hemisphere 48.1
1927 Female, age 91, both hemispheres 46.8
2010 Male, age 76, both hemispheres 44.4
2531 Female, age 67, both hemispheres 40.1
2246 Female, age 85, both hemispheres 39.5
2528 Male, age 74, both hemispheres 36.4
Entorhinal gyrus
nTPM: 46.9
1938 Female, age 85, left hemisphere 50.7
1787 Male, age 76, left hemisphere 49.5
2613 Female, age 94, left hemisphere 49.2
2764 Male, age 80, right hemisphere 48.7
2686 Male, age 75, right hemisphere 45.9
2117 Female, age 91, right hemisphere 37.6
Hippocampus, CA1
nTPM: 45.5
2749 Male, age 80, left hemisphere 57.7
2045 Male, age 76, both hemispheres 46.9
1873 Female, age 85, both hemispheres 46.4
2082 Female, age 91, right hemisphere 38.8
2527 Male, age 74, both hemispheres 37.7
Hippocampus, CA2
nTPM: 40.7
1892 Male, age 76, both hemispheres 46.5
1963 Male, age 80, left hemisphere 46.5
2437 Female, age 94, left hemisphere 40.7
1940 Female, age 85, left hemisphere 37.5
2249 Male, age 74, both hemispheres 36.5
2113 Female, age 91, right hemisphere 36.4
Hippocampus, CA3
nTPM: 44.6
2620 Female, age 94, left hemisphere 52.1
2861 Female, age 67, both hemispheres 49.7
2137 Male, age 80, left hemisphere 45.7
1867 Male, age 76, both hemispheres 44.9
1891 Female, age 85, both hemispheres 40.0
2436 Male, age 74, both hemispheres 35.3
Parahippocampal cortex
nTPM: 42.9
2622 Female, age 67, right hemisphere 46.9
1933 Female, age 85, both hemispheres 46.7
2245 Female, age 91, both hemispheres 45.1
2692 Male, age 74, both hemispheres 43.4
2018 Male, age 76, both hemispheres 43.1
2250 Female, age 67, right hemisphere 42.3
2532 Female, age 72, left hemisphere 41.9
1850 Male, age 80, both hemispheres 41.8
1990 Female, age 91, right hemisphere 41.7
2693 Female, age 94, both hemispheres 36.0
Perirhinal gyrus
nTPM: 45.2
1794 Male, age 80, right hemisphere 51.1
1847 Female, age 91, left hemisphere 48.2
1841 Female, age 85, right hemisphere 45.4
2848 Male, age 76, right hemisphere 43.5
2521 Female, age 94, right hemisphere 37.7
Subiculum
nTPM: 41.3
2619 Male, age 74, both hemispheres 45.7
2042 Male, age 76, both hemispheres 45.0
1977 Female, age 85, both hemispheres 42.9
1901 Male, age 80, both hemispheres 42.7
2729 Female, age 91, right hemisphere 37.3
2438 Female, age 94, left hemisphere 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.5
Samples: 197

Max nTPM: 189.1
Min nTPM: 15.8
Std nTPM: 28.9
Median nTPM: 94.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 189.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 184.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 181.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 180.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 179.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 179.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 177.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 163.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 161.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 147.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 143.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.0
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 71.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.2
Samples: 4

Max nTPM: 69.0
Min nTPM: 39.7
Sample A Female 69.0
Sample B Female 53.7
Sample C Male 42.5
Sample D Male 39.7
Entorhinal cortex
nTPM: 44.5
Samples: 4

Max nTPM: 59.0
Min nTPM: 28.8
Sample A Female 38.3
Sample B Female 51.8
Sample C Male 59.0
Sample D Male 28.8
Subiculum
nTPM: 44.2
Samples: 4

Max nTPM: 61.9
Min nTPM: 31.8
Sample A Female 61.9
Sample B Female 44.8
Sample C Male 31.8
Sample D Male 38.3
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 57.0
Min nTPM: 32.3
Sample A Female 47.9
Sample B Female 40.4
Sample C Male 57.0
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.6
Sample A Male 13.7
Sample B Male 16.0
Sample C Female 11.6
Sample D Female 12.7
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.9
Sample A Male 11.2
Sample B Male 13.3
Sample C Female 10.9
Sample D Female 13.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
71493026 Antisense, RP_050913_02_A06, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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