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PPT1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:93.6 nTPM
HPA:93.6 nTPM
GTEx:60.0 nTPM
FANTOM5:117.0 Scaled Tags Per Million
Pig:74.5 nTPM
Mouse:94.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021546
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.6
Sample id Sample description nTPM
Hippocampus
nTPM: 90.3
1898 Male, age 80, left hemisphere 97.9
2529 Female, age 94, left hemisphere 90.4
2148 Female, age 91, left hemisphere 89.3
2621 Female, age 67, right hemisphere 89.2
1855 Male, age 76, left hemisphere 89.1
1911 Female, age 85, right hemisphere 86.0
Dentate gyrus
nTPM: 88.3
1927 Female, age 91, both hemispheres 93.4
2010 Male, age 76, both hemispheres 90.6
2528 Male, age 74, both hemispheres 90.2
2246 Female, age 85, both hemispheres 89.7
2530 Female, age 94, left hemisphere 84.8
2531 Female, age 67, both hemispheres 80.9
Entorhinal gyrus
nTPM: 87.4
1787 Male, age 76, left hemisphere 92.3
1938 Female, age 85, left hemisphere 92.0
2117 Female, age 91, right hemisphere 91.2
2764 Male, age 80, right hemisphere 88.3
2613 Female, age 94, left hemisphere 82.9
2686 Male, age 75, right hemisphere 77.9
Hippocampus, CA1
nTPM: 90.4
2749 Male, age 80, left hemisphere 94.2
2527 Male, age 74, both hemispheres 91.4
2045 Male, age 76, both hemispheres 89.9
1873 Female, age 85, both hemispheres 88.9
2082 Female, age 91, right hemisphere 87.8
Hippocampus, CA2
nTPM: 92.1
1892 Male, age 76, both hemispheres 99.0
2249 Male, age 74, both hemispheres 95.2
1940 Female, age 85, left hemisphere 92.9
1963 Male, age 80, left hemisphere 89.5
2113 Female, age 91, right hemisphere 88.6
2437 Female, age 94, left hemisphere 87.4
Hippocampus, CA3
nTPM: 87.7
1867 Male, age 76, both hemispheres 93.5
2436 Male, age 74, both hemispheres 91.3
1891 Female, age 85, both hemispheres 90.0
2137 Male, age 80, left hemisphere 90.0
2620 Female, age 94, left hemisphere 82.9
2861 Female, age 67, both hemispheres 78.3
Parahippocampal cortex
nTPM: 89.1
1850 Male, age 80, both hemispheres 95.5
2250 Female, age 67, right hemisphere 94.5
1990 Female, age 91, right hemisphere 92.4
2018 Male, age 76, both hemispheres 88.8
2693 Female, age 94, both hemispheres 88.5
1933 Female, age 85, both hemispheres 88.1
2245 Female, age 91, both hemispheres 88.0
2692 Male, age 74, both hemispheres 86.8
2532 Female, age 72, left hemisphere 86.2
2622 Female, age 67, right hemisphere 82.5
Perirhinal gyrus
nTPM: 93.6
1847 Female, age 91, left hemisphere 96.6
1794 Male, age 80, right hemisphere 96.0
2521 Female, age 94, right hemisphere 92.9
1841 Female, age 85, right hemisphere 91.5
2848 Male, age 76, right hemisphere 91.2
Subiculum
nTPM: 90.1
1977 Female, age 85, both hemispheres 92.2
2729 Female, age 91, right hemisphere 92.1
1901 Male, age 80, both hemispheres 91.5
2619 Male, age 74, both hemispheres 89.4
2042 Male, age 76, both hemispheres 88.0
2438 Female, age 94, left hemisphere 87.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.0
Samples: 197

Max nTPM: 104.4
Min nTPM: 37.4
Std nTPM: 11.3
Median nTPM: 58.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 104.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 87.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 86.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 85.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 84.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 84.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 82.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 81.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 81.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 80.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 79.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.0
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 112.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.5
Samples: 4

Max nTPM: 88.8
Min nTPM: 58.0
Sample A Female 88.8
Sample B Female 74.9
Sample C Male 76.1
Sample D Male 58.0
Entorhinal cortex
nTPM: 69.3
Samples: 4

Max nTPM: 80.4
Min nTPM: 53.0
Sample A Female 72.4
Sample B Female 80.4
Sample C Male 71.5
Sample D Male 53.0
Subiculum
nTPM: 61.6
Samples: 4

Max nTPM: 84.4
Min nTPM: 52.4
Sample A Female 84.4
Sample B Female 57.1
Sample C Male 52.4
Sample D Male 52.4
Ventral hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 74.6
Min nTPM: 49.4
Sample A Female 70.6
Sample B Female 49.4
Sample C Male 74.6
Sample D Male 63.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.7
Samples: 4

Max nTPM: 100.3
Min nTPM: 88.4
Sample A Male 92.9
Sample B Male 97.2
Sample C Female 100.3
Sample D Female 88.4
Hippocampal formation
nTPM: 92.6
Samples: 4

Max nTPM: 103.1
Min nTPM: 84.0
Sample A Male 103.1
Sample B Male 90.6
Sample C Female 84.0
Sample D Female 92.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69817264 Antisense, RP_050510_03_A01, Mouse strain C57BL/6J (56 days, male) 3.9
70919041 Antisense, RP_050712_04_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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