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VPS25
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:23.1 nTPM
FANTOM5:32.3 Scaled Tags Per Million
Pig:50.7 nTPM
Mouse:94.9 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052217Antibody HPA057284Antibody CAB004978
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
2529 Female, age 94, left hemisphere 33.7
1855 Male, age 76, left hemisphere 33.6
1898 Male, age 80, left hemisphere 33.6
2148 Female, age 91, left hemisphere 32.5
2621 Female, age 67, right hemisphere 32.4
1911 Female, age 85, right hemisphere 31.4
Dentate gyrus
nTPM: 32.8
2010 Male, age 76, both hemispheres 34.4
2246 Female, age 85, both hemispheres 33.0
2531 Female, age 67, both hemispheres 32.5
1927 Female, age 91, both hemispheres 32.4
2528 Male, age 74, both hemispheres 32.2
2530 Female, age 94, left hemisphere 32.1
Entorhinal gyrus
nTPM: 31.6
1938 Female, age 85, left hemisphere 32.9
2764 Male, age 80, right hemisphere 32.3
1787 Male, age 76, left hemisphere 31.8
2117 Female, age 91, right hemisphere 31.7
2686 Male, age 75, right hemisphere 30.4
2613 Female, age 94, left hemisphere 30.2
Hippocampus, CA1
nTPM: 32.5
2749 Male, age 80, left hemisphere 33.3
2045 Male, age 76, both hemispheres 33.2
1873 Female, age 85, both hemispheres 32.4
2082 Female, age 91, right hemisphere 32.0
2527 Male, age 74, both hemispheres 31.5
Hippocampus, CA2
nTPM: 32.7
1892 Male, age 76, both hemispheres 34.4
2249 Male, age 74, both hemispheres 33.6
1963 Male, age 80, left hemisphere 32.8
1940 Female, age 85, left hemisphere 32.3
2437 Female, age 94, left hemisphere 32.1
2113 Female, age 91, right hemisphere 31.2
Hippocampus, CA3
nTPM: 32.9
2436 Male, age 74, both hemispheres 35.2
2620 Female, age 94, left hemisphere 34.9
2137 Male, age 80, left hemisphere 32.7
2861 Female, age 67, both hemispheres 31.7
1891 Female, age 85, both hemispheres 31.6
1867 Male, age 76, both hemispheres 31.5
Parahippocampal cortex
nTPM: 31.1
1850 Male, age 80, both hemispheres 32.5
1990 Female, age 91, right hemisphere 32.0
2250 Female, age 67, right hemisphere 32.0
2018 Male, age 76, both hemispheres 31.6
1933 Female, age 85, both hemispheres 31.2
2622 Female, age 67, right hemisphere 31.0
2693 Female, age 94, both hemispheres 30.5
2245 Female, age 91, both hemispheres 30.1
2532 Female, age 72, left hemisphere 30.0
2692 Male, age 74, both hemispheres 30.0
Perirhinal gyrus
nTPM: 32.0
1794 Male, age 80, right hemisphere 33.2
1847 Female, age 91, left hemisphere 33.1
1841 Female, age 85, right hemisphere 32.4
2848 Male, age 76, right hemisphere 31.1
2521 Female, age 94, right hemisphere 30.3
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 32.3
2729 Female, age 91, right hemisphere 32.3
2619 Male, age 74, both hemispheres 31.9
2042 Male, age 76, both hemispheres 31.7
1901 Male, age 80, both hemispheres 31.3
2438 Female, age 94, left hemisphere 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.1
Samples: 197

Max nTPM: 43.7
Min nTPM: 13.9
Std nTPM: 4.0
Median nTPM: 22.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 32.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 31.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 31.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 31.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 31.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 30.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 30.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.3
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 21.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.7
Samples: 4

Max nTPM: 66.9
Min nTPM: 36.5
Sample A Female 66.9
Sample B Female 51.0
Sample C Male 48.5
Sample D Male 36.5
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 45.8
Min nTPM: 32.6
Sample A Female 44.5
Sample B Female 45.8
Sample C Male 38.5
Sample D Male 32.6
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 49.3
Min nTPM: 37.1
Sample A Female 49.3
Sample B Female 37.9
Sample C Male 37.6
Sample D Male 37.1
Ventral hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 52.8
Min nTPM: 33.8
Sample A Female 52.8
Sample B Female 33.8
Sample C Male 51.2
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.0
Samples: 4

Max nTPM: 91.9
Min nTPM: 79.7
Sample A Male 79.7
Sample B Male 82.0
Sample C Female 90.2
Sample D Female 91.9
Hippocampal formation
nTPM: 94.9
Samples: 4

Max nTPM: 98.2
Min nTPM: 86.8
Sample A Male 98.2
Sample B Male 86.8
Sample C Female 97.4
Sample D Female 97.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69261415 Antisense, RP_050118_03_D06, Mouse strain C57BL/6J (56 days, male) 6.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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