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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:31.7 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Pig:17.8 nTPM
Mouse:76.7 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010025
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
2529 Female, age 94, left hemisphere 31.0
1898 Male, age 80, left hemisphere 30.8
1855 Male, age 76, left hemisphere 29.6
2621 Female, age 67, right hemisphere 29.3
2148 Female, age 91, left hemisphere 28.8
1911 Female, age 85, right hemisphere 28.7
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 30.7
2528 Male, age 74, both hemispheres 29.9
2010 Male, age 76, both hemispheres 29.1
2246 Female, age 85, both hemispheres 28.7
2531 Female, age 67, both hemispheres 28.5
1927 Female, age 91, both hemispheres 28.0
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 29.2
1938 Female, age 85, left hemisphere 29.1
2764 Male, age 80, right hemisphere 28.8
2686 Male, age 75, right hemisphere 28.0
2613 Female, age 94, left hemisphere 27.2
Hippocampus, CA1
nTPM: 29.4
2527 Male, age 74, both hemispheres 31.1
1873 Female, age 85, both hemispheres 29.5
2749 Male, age 80, left hemisphere 29.5
2045 Male, age 76, both hemispheres 28.7
2082 Female, age 91, right hemisphere 28.3
Hippocampus, CA2
nTPM: 29.4
2249 Male, age 74, both hemispheres 30.6
1963 Male, age 80, left hemisphere 29.8
1940 Female, age 85, left hemisphere 29.6
1892 Male, age 76, both hemispheres 29.2
2113 Female, age 91, right hemisphere 28.7
2437 Female, age 94, left hemisphere 28.4
Hippocampus, CA3
nTPM: 29.3
2436 Male, age 74, both hemispheres 31.9
1891 Female, age 85, both hemispheres 30.1
2137 Male, age 80, left hemisphere 29.3
1867 Male, age 76, both hemispheres 29.1
2861 Female, age 67, both hemispheres 27.9
2620 Female, age 94, left hemisphere 27.6
Parahippocampal cortex
nTPM: 28.9
2018 Male, age 76, both hemispheres 29.6
2245 Female, age 91, both hemispheres 29.5
2250 Female, age 67, right hemisphere 29.5
1933 Female, age 85, both hemispheres 29.2
2692 Male, age 74, both hemispheres 29.2
2532 Female, age 72, left hemisphere 29.0
1990 Female, age 91, right hemisphere 28.7
1850 Male, age 80, both hemispheres 28.6
2622 Female, age 67, right hemisphere 28.4
2693 Female, age 94, both hemispheres 27.6
Perirhinal gyrus
nTPM: 28.3
1841 Female, age 85, right hemisphere 29.1
2521 Female, age 94, right hemisphere 28.4
1847 Female, age 91, left hemisphere 28.0
1794 Male, age 80, right hemisphere 27.9
2848 Male, age 76, right hemisphere 27.9
Subiculum
nTPM: 29.8
2042 Male, age 76, both hemispheres 30.6
2438 Female, age 94, left hemisphere 30.6
1977 Female, age 85, both hemispheres 29.8
1901 Male, age 80, both hemispheres 29.7
2729 Female, age 91, right hemisphere 29.1
2619 Male, age 74, both hemispheres 28.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.7
Samples: 197

Max nTPM: 98.9
Min nTPM: 15.7
Std nTPM: 8.9
Median nTPM: 30.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 98.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 59.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 56.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 52.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 50.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 49.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 47.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 46.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 45.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 45.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 44.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 39.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 24.4
Min nTPM: 11.5
Sample A Female 24.4
Sample B Female 15.4
Sample C Male 19.8
Sample D Male 11.5
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.9
Sample A Female 14.7
Sample B Female 18.6
Sample C Male 14.9
Sample D Male 13.9
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 19.8
Min nTPM: 13.1
Sample A Female 19.8
Sample B Female 14.0
Sample C Male 13.1
Sample D Male 14.6
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.0
Sample A Female 16.6
Sample B Female 12.0
Sample C Male 16.8
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 68.5
Min nTPM: 65.2
Sample A Male 65.2
Sample B Male 66.2
Sample C Female 68.5
Sample D Female 66.9
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 84.8
Min nTPM: 72.2
Sample A Male 84.8
Sample B Male 72.2
Sample C Female 75.8
Sample D Female 73.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69838758 Antisense, RP_050324_01_G11, Mouse strain C57BL/6J (56 days, male) 12.1

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