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TIMM10B
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.2 nTPM
HPA:18.2 nTPM
GTEx:18.8 nTPM
FANTOM5:77.6 Scaled Tags Per Million

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 18.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 13.5
2411 Female, age 72, unknown 14.7
1833 Male, age 53, unknown 14.4
2019 Male, age 18, unknown 14.4
1827 Male, age 72, unknown 13.7
2666 Male, age 74, left hemisphere 13.7
1830 Male, age 51, unknown 13.4
2219 Male, age 76, both hemispheres 13.4
2828 Female, age 72, unknown 13.4
1870 Female, age 42, unknown 13.0
2586 Male, age 75, left hemisphere 10.5
Dorsal raphe nucleus
nTPM: 13.9
2750 Male, age 76, both hemispheres 16.6
2047 Male, age 72, unknown 14.3
1828 Male, age 53, unknown 14.1
2298 Female, age 72, unknown 13.0
2016 Female, age 72, unknown 11.3
Inferior colliculus
nTPM: 12.3
2097 Female, age 72, unknown 13.1
1890 Male, age 53, unknown 12.9
1848 Female, age 42, unknown 11.9
2849 Male, age 72, unknown 11.5
Median raphe nucleus
nTPM: 18.2
2220 Male, age 76, midline 18.2
Pedunculopontine tegmental nucleus
nTPM: 14.8
2334 Male, age 80, both hemispheres 16.6
1921 Female, age 85, both hemispheres 15.3
2338 Male, age 61, both hemispheres 12.4
Periaquaductal grey, anterior
nTPM: 14.2
1947 Male, age 18, unknown 15.8
2502 Female, age 75, unknown 15.6
1795 Male, age 51, unknown 11.2
Periaquaductal grey, dorsal
nTPM: 12.7
2850 Male, age 76, both hemispheres 14.0
2464 Female, age 72, unknown 13.6
1831 Male, age 72, unknown 11.6
1840 Male, age 53, unknown 11.4
Periaquaductal grey, lateral
nTPM: 12.2
2140 Male, age 76, both hemispheres 13.3
2053 Male, age 18, unknown 11.9
2272 Male, age 74, both hemispheres 11.6
Pretectal area
nTPM: 13.8
1816 Male, age 51, unknown 16.0
1817 Female, age 42, unknown 15.2
2007 Male, age 72, unknown 14.7
2316 Male, age 76, right hemisphere 14.3
2667 Female, age 75, unknown 14.1
1815 Male, age 53, unknown 14.0
1944 Female, age 72, unknown 13.5
2224 Female, age 72, unknown 13.1
2825 Male, age 18, unknown 12.8
2407 Male, age 75, both hemispheres 12.7
2273 Male, age 74, both hemispheres 11.8
Red nucleus
nTPM: 13.9
2725 Female, age 75, unknown 15.7
2503 Female, age 72, unknown 15.3
2823 Male, age 76, right hemisphere 15.0
1821 Female, age 72, unknown 14.7
1865 Male, age 51, unknown 14.4
2588 Male, age 74, left hemisphere 14.4
1904 Male, age 53, unknown 13.7
1954 Female, age 42, unknown 13.2
2227 Male, age 72, unknown 12.8
2785 Male, age 18, unknown 12.6
2584 Male, age 75, left hemisphere 12.5
2769 Male, age 72, unknown 12.3
Substantia nigra
nTPM: 14.4
2241 Male, age 72, unknown 21.3
1916 Female, age 42, unknown 17.7
1941 Male, age 53, unknown 15.0
1851 Male, age 51, unknown 14.5
1889 Female, age 72, unknown 14.5
2699 Male, age 18, unknown 14.0
2409 Female, age 72, unknown 12.5
2665 Male, age 74, both hemispheres 12.3
2590 Female, age 75, unknown 11.3
2583 Male, age 75, right hemisphere 10.8
Superior colliculus
nTPM: 12.8
1895 Male, age 76, right hemisphere 14.8
2087 Female, age 72, unknown 14.1
1839 Male, age 51, unknown 13.7
2587 Male, age 74, left hemisphere 13.6
2261 Male, age 18, unknown 13.0
1796 Male, age 53, unknown 12.6
2668 Female, age 75, unknown 12.4
1913 Female, age 42, unknown 12.2
2664 Male, age 75, both hemispheres 11.3
1995 Male, age 72, unknown 10.1
Ventral tegmental area
nTPM: 14.6
2218 Male, age 76, both hemispheres 16.9
2410 Female, age 72, unknown 15.3
1915 Female, age 42, unknown 14.8
1942 Male, age 51, unknown 13.7
2223 Female, age 72, unknown 13.5
2021 Male, age 53, unknown 13.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 18.8
Samples: 139

Max nTPM: 31.0
Min nTPM: 11.0
Std nTPM: 3.9
Median nTPM: 18.3
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 31.0
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 29.8
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 29.4
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 29.1
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 28.8
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 28.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 28.0
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 27.3
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 27.1
GTEX-1HB9E-0011-R2b-SM-A96RW 50-59 years, male 26.4
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 26.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 77.6
FF:10158-103A5 76 years, female 77.6

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