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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:12.7 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:33.3 nTPM
Mouse:72.5 nTPM
Allen mouse:9.9 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Amygdala
nTPM: 1.9
1987 Female, age 91, left hemisphere 3.9
2517 Female, age 94, left hemisphere 3.9
2514 Male, age 75, right hemisphere 1.7
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 9.4
2685 Female, age 94, left hemisphere 13.7
2110 Male, age 80, left hemisphere 13.2
2243 Female, age 91, right hemisphere 11.8
2827 Female, age 67, right hemisphere 7.9
1955 Male, age 76, both hemispheres 5.2
2609 Male, age 75, right hemisphere 4.8
Central amygdala
nTPM: 3.9
2239 Male, age 80, left hemisphere 10.7
2826 Female, age 94, left hemisphere 6.7
2515 Male, age 75, right hemisphere 1.8
2701 Female, age 91, right hemisphere 0.2
1905 Male, age 76, both hemispheres 0.0
Corticomedial amygdala
nTPM: 8.6
2829 Male, age 80, left hemisphere 12.4
2535 Female, age 67, right hemisphere 11.2
2429 Female, age 94, left hemisphere 10.8
2242 Female, age 91, right hemisphere 9.7
2428 Male, age 75, right hemisphere 3.7
2240 Male, age 76, both hemispheres 3.6
Lateral amygdala
nTPM: 6.2
2256 Male, age 80, left hemisphere 11.7
2534 Female, age 94, left hemisphere 10.8
2255 Female, age 91, right hemisphere 4.5
1883 Male, age 76, both hemispheres 3.9
2516 Male, age 75, right hemisphere 3.8
2830 Female, age 67, right hemisphere 2.4
Stria terminalis, bed nucleus
nTPM: 18.3
2486 Female, age 94, both hemispheres 28.1
1974 Female, age 91, both hemispheres 23.9
2201 Male, age 74, unknown 3.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 12.7
Samples: 152

Max nTPM: 28.2
Min nTPM: 4.3
Std nTPM: 5.5
Median nTPM: 11.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 28.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 27.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 27.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 27.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 26.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 24.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 23.6
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 23.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 21.8
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 21.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 21.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 0.0
FF:10151-102I7 76 years, female 0.0

AMYGDALA - Pig RNA-seqi
Average nTPM 33.3
Pig sample Sample description nTPM
Amygdala
nTPM: 33.3
Samples: 4

Max nTPM: 43.7
Min nTPM: 21.3
Sample A Female 43.7
Sample B Female 21.3
Sample C Male 39.8
Sample D Male 28.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 72.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 72.5
Samples: 4

Max nTPM: 82.5
Min nTPM: 67.5
Sample A Male 82.5
Sample B Male 67.5
Sample C Female 67.9
Sample D Female 72.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.9
71670483 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 9.9
69736040 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 8.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.