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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.4 nTPM
HPA:45.4 nTPM
GTEx:19.7 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:55.1 nTPM
Mouse:102.9 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
2621 Female, age 67, right hemisphere 35.8
2148 Female, age 91, left hemisphere 34.6
1855 Male, age 76, left hemisphere 32.3
1911 Female, age 85, right hemisphere 29.2
1898 Male, age 80, left hemisphere 28.7
2529 Female, age 94, left hemisphere 17.7
Dentate gyrus
nTPM: 30.4
2531 Female, age 67, both hemispheres 47.9
1927 Female, age 91, both hemispheres 43.2
2010 Male, age 76, both hemispheres 28.8
2528 Male, age 74, both hemispheres 24.1
2246 Female, age 85, both hemispheres 20.5
2530 Female, age 94, left hemisphere 17.6
Entorhinal gyrus
nTPM: 25.3
2613 Female, age 94, left hemisphere 39.6
2764 Male, age 80, right hemisphere 37.3
1938 Female, age 85, left hemisphere 23.9
1787 Male, age 76, left hemisphere 23.5
2686 Male, age 75, right hemisphere 18.4
2117 Female, age 91, right hemisphere 9.1
Hippocampus, CA1
nTPM: 41.5
2749 Male, age 80, left hemisphere 87.0
2045 Male, age 76, both hemispheres 47.1
1873 Female, age 85, both hemispheres 30.9
2527 Male, age 74, both hemispheres 29.1
2082 Female, age 91, right hemisphere 13.3
Hippocampus, CA2
nTPM: 23.9
1963 Male, age 80, left hemisphere 39.4
1892 Male, age 76, both hemispheres 35.2
2249 Male, age 74, both hemispheres 21.4
2113 Female, age 91, right hemisphere 19.2
2437 Female, age 94, left hemisphere 14.5
1940 Female, age 85, left hemisphere 13.7
Hippocampus, CA3
nTPM: 45.4
2137 Male, age 80, left hemisphere 84.1
2620 Female, age 94, left hemisphere 53.4
2861 Female, age 67, both hemispheres 46.3
1867 Male, age 76, both hemispheres 36.8
2436 Male, age 74, both hemispheres 31.5
1891 Female, age 85, both hemispheres 20.3
Parahippocampal cortex
nTPM: 22.6
2245 Female, age 91, both hemispheres 32.5
2018 Male, age 76, both hemispheres 28.3
1850 Male, age 80, both hemispheres 27.5
2532 Female, age 72, left hemisphere 25.3
1933 Female, age 85, both hemispheres 24.2
2622 Female, age 67, right hemisphere 21.0
2693 Female, age 94, both hemispheres 20.4
1990 Female, age 91, right hemisphere 18.6
2250 Female, age 67, right hemisphere 15.9
2692 Male, age 74, both hemispheres 12.9
Perirhinal gyrus
nTPM: 26.6
1847 Female, age 91, left hemisphere 31.8
2848 Male, age 76, right hemisphere 29.0
1794 Male, age 80, right hemisphere 28.5
2521 Female, age 94, right hemisphere 23.3
1841 Female, age 85, right hemisphere 20.6
Subiculum
nTPM: 19.5
1901 Male, age 80, both hemispheres 33.1
2042 Male, age 76, both hemispheres 23.6
2729 Female, age 91, right hemisphere 21.9
1977 Female, age 85, both hemispheres 20.4
2619 Male, age 74, both hemispheres 10.0
2438 Female, age 94, left hemisphere 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 60.8
Min nTPM: 3.7
Std nTPM: 11.2
Median nTPM: 18.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 46.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 40.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10169-103B7 60 years, female 0.0
FF:10153-102I9 76 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.1
Samples: 4

Max nTPM: 70.3
Min nTPM: 35.4
Sample A Female 70.3
Sample B Female 67.7
Sample C Male 35.4
Sample D Male 47.0
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 53.6
Min nTPM: 35.3
Sample A Female 43.4
Sample B Female 35.3
Sample C Male 53.6
Sample D Male 37.1
Subiculum
nTPM: 39.9
Samples: 4

Max nTPM: 44.7
Min nTPM: 35.9
Sample A Female 44.7
Sample B Female 35.9
Sample C Male 36.7
Sample D Male 42.2
Ventral hippocampus
nTPM: 51.9
Samples: 4

Max nTPM: 68.1
Min nTPM: 32.6
Sample A Female 47.4
Sample B Female 32.6
Sample C Male 59.4
Sample D Male 68.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.8
Samples: 4

Max nTPM: 105.3
Min nTPM: 75.4
Sample A Male 75.7
Sample B Male 75.4
Sample C Female 78.8
Sample D Female 105.3
Hippocampal formation
nTPM: 103.0
Samples: 4

Max nTPM: 131.6
Min nTPM: 84.6
Sample A Male 90.7
Sample B Male 105.0
Sample C Female 131.6
Sample D Female 84.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
71670483 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 10.2
69736040 Antisense, RP_050503_04_A10, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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