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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:15.0 nTPM
FANTOM5:20.4 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:33.5 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030342
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1898 Male, age 80, left hemisphere 15.1
2621 Female, age 67, right hemisphere 13.8
1855 Male, age 76, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.3
1911 Female, age 85, right hemisphere 11.6
2529 Female, age 94, left hemisphere 11.1
Dentate gyrus
nTPM: 12.3
2530 Female, age 94, left hemisphere 14.1
1927 Female, age 91, both hemispheres 13.2
2010 Male, age 76, both hemispheres 12.5
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.5
2528 Male, age 74, both hemispheres 10.1
Entorhinal gyrus
nTPM: 13.5
2764 Male, age 80, right hemisphere 14.9
1938 Female, age 85, left hemisphere 14.3
2613 Female, age 94, left hemisphere 13.6
1787 Male, age 76, left hemisphere 13.5
2117 Female, age 91, right hemisphere 12.9
2686 Male, age 75, right hemisphere 11.9
Hippocampus, CA1
nTPM: 13.0
2749 Male, age 80, left hemisphere 16.4
2045 Male, age 76, both hemispheres 12.5
2527 Male, age 74, both hemispheres 12.5
1873 Female, age 85, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.6
Hippocampus, CA2
nTPM: 12.7
1963 Male, age 80, left hemisphere 15.2
1892 Male, age 76, both hemispheres 14.2
2437 Female, age 94, left hemisphere 12.6
2249 Male, age 74, both hemispheres 11.8
2113 Female, age 91, right hemisphere 11.7
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 12.5
2861 Female, age 67, both hemispheres 13.7
2620 Female, age 94, left hemisphere 13.4
2137 Male, age 80, left hemisphere 12.8
1867 Male, age 76, both hemispheres 12.3
2436 Male, age 74, both hemispheres 12.1
1891 Female, age 85, both hemispheres 10.9
Parahippocampal cortex
nTPM: 13.1
1850 Male, age 80, both hemispheres 14.2
2250 Female, age 67, right hemisphere 13.7
1933 Female, age 85, both hemispheres 13.5
2018 Male, age 76, both hemispheres 13.5
2693 Female, age 94, both hemispheres 13.2
2245 Female, age 91, both hemispheres 13.1
2532 Female, age 72, left hemisphere 13.1
2622 Female, age 67, right hemisphere 13.1
1990 Female, age 91, right hemisphere 12.7
2692 Male, age 74, both hemispheres 10.8
Perirhinal gyrus
nTPM: 14.3
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.3
1841 Female, age 85, right hemisphere 13.8
2848 Male, age 76, right hemisphere 13.4
2521 Female, age 94, right hemisphere 12.8
Subiculum
nTPM: 12.2
1977 Female, age 85, both hemispheres 13.2
2438 Female, age 94, left hemisphere 13.0
1901 Male, age 80, both hemispheres 11.7
2619 Male, age 74, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.7
2042 Male, age 76, both hemispheres 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 26.4
Min nTPM: 7.6
Std nTPM: 3.3
Median nTPM: 14.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 26.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 24.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 23.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 22.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 22.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 21.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 21.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 20.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 20.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.4
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 18.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.8
Min nTPM: 10.9
Sample A Female 17.8
Sample B Female 15.9
Sample C Male 14.7
Sample D Male 10.9
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.6
Sample A Female 15.5
Sample B Female 11.6
Sample C Male 14.5
Sample D Male 12.8
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.0
Sample A Female 19.4
Sample B Female 13.2
Sample C Male 16.4
Sample D Male 13.0
Ventral hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 21.5
Min nTPM: 10.8
Sample A Female 15.8
Sample B Female 10.8
Sample C Male 21.5
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 29.8
Sample A Male 32.1
Sample B Male 34.9
Sample C Female 29.8
Sample D Female 36.9
Hippocampal formation
nTPM: 32.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.2
Sample A Male 28.2
Sample B Male 34.9
Sample C Female 36.4
Sample D Female 31.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
71489796 Antisense, RP_050614_02_H03, Mouse strain C57BL/6J (56 days, male) 10.3

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The Human Protein Atlas

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