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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:20.9 nTPM
HPA:20.9 nTPM
GTEx:19.1 nTPM
FANTOM5:73.1 Scaled Tags Per Million
Pig:20.7 nTPM
Mouse:27.6 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011478
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.9
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
2148 Female, age 91, left hemisphere 20.9
1855 Male, age 76, left hemisphere 20.6
2529 Female, age 94, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.2
1911 Female, age 85, right hemisphere 18.2
1898 Male, age 80, left hemisphere 17.5
Dentate gyrus
nTPM: 19.2
2010 Male, age 76, both hemispheres 20.4
2530 Female, age 94, left hemisphere 19.8
1927 Female, age 91, both hemispheres 19.4
2531 Female, age 67, both hemispheres 18.7
2528 Male, age 74, both hemispheres 18.5
2246 Female, age 85, both hemispheres 18.3
Entorhinal gyrus
nTPM: 18.6
1938 Female, age 85, left hemisphere 19.6
1787 Male, age 76, left hemisphere 19.2
2613 Female, age 94, left hemisphere 19.0
2686 Male, age 75, right hemisphere 18.1
2764 Male, age 80, right hemisphere 18.1
2117 Female, age 91, right hemisphere 17.6
Hippocampus, CA1
nTPM: 20.9
2749 Male, age 80, left hemisphere 25.2
2045 Male, age 76, both hemispheres 24.0
1873 Female, age 85, both hemispheres 19.3
2527 Male, age 74, both hemispheres 18.8
2082 Female, age 91, right hemisphere 17.0
Hippocampus, CA2
nTPM: 18.1
1892 Male, age 76, both hemispheres 21.6
2437 Female, age 94, left hemisphere 18.5
1963 Male, age 80, left hemisphere 18.0
2113 Female, age 91, right hemisphere 17.3
2249 Male, age 74, both hemispheres 16.9
1940 Female, age 85, left hemisphere 16.1
Hippocampus, CA3
nTPM: 20.9
2137 Male, age 80, left hemisphere 26.3
1867 Male, age 76, both hemispheres 22.9
2620 Female, age 94, left hemisphere 20.7
2861 Female, age 67, both hemispheres 19.7
1891 Female, age 85, both hemispheres 18.0
2436 Male, age 74, both hemispheres 17.6
Parahippocampal cortex
nTPM: 19.3
2692 Male, age 74, both hemispheres 22.8
2622 Female, age 67, right hemisphere 21.5
2018 Male, age 76, both hemispheres 20.5
2245 Female, age 91, both hemispheres 19.3
2250 Female, age 67, right hemisphere 18.9
2532 Female, age 72, left hemisphere 18.8
1990 Female, age 91, right hemisphere 18.6
1850 Male, age 80, both hemispheres 18.1
1933 Female, age 85, both hemispheres 17.5
2693 Female, age 94, both hemispheres 17.4
Perirhinal gyrus
nTPM: 18.2
1847 Female, age 91, left hemisphere 19.9
1841 Female, age 85, right hemisphere 18.5
2521 Female, age 94, right hemisphere 18.1
2848 Male, age 76, right hemisphere 17.6
1794 Male, age 80, right hemisphere 17.0
Subiculum
nTPM: 19.7
2619 Male, age 74, both hemispheres 22.5
2729 Female, age 91, right hemisphere 20.0
2042 Male, age 76, both hemispheres 19.8
2438 Female, age 94, left hemisphere 19.8
1901 Male, age 80, both hemispheres 18.5
1977 Female, age 85, both hemispheres 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 29.9
Min nTPM: 12.7
Std nTPM: 2.6
Median nTPM: 18.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 28.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 26.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 26.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 25.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 23.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.1
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 66.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.5
Sample A Female 21.1
Sample B Female 16.8
Sample C Male 16.7
Sample D Male 12.5
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 18.2
Sample A Female 21.9
Sample B Female 21.3
Sample C Male 18.2
Sample D Male 21.4
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.5
Sample A Female 21.4
Sample B Female 16.8
Sample C Male 16.5
Sample D Male 18.2
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.1
Sample A Female 18.2
Sample B Female 13.1
Sample C Male 17.6
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 31.5
Min nTPM: 25.6
Sample A Male 26.4
Sample B Male 31.5
Sample C Female 25.6
Sample D Female 27.0
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 21.3
Min nTPM: 17.4
Sample A Male 18.0
Sample B Male 17.4
Sample C Female 19.1
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
69095946 Antisense, RP_050324_02_D07, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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