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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:25.9 nTPM
HPA:25.9 nTPM
GTEx:27.5 nTPM
FANTOM5:104.3 Scaled Tags Per Million
Pig:57.6 nTPM
Mouse:113.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008208Antibody HPA011389
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.0
1898 Male, age 80, left hemisphere 33.3
1855 Male, age 76, left hemisphere 21.9
2148 Female, age 91, left hemisphere 20.9
2621 Female, age 67, right hemisphere 20.2
1911 Female, age 85, right hemisphere 18.0
2529 Female, age 94, left hemisphere 17.5
Dentate gyrus
nTPM: 22.4
2010 Male, age 76, both hemispheres 27.2
1927 Female, age 91, both hemispheres 25.4
2531 Female, age 67, both hemispheres 21.9
2528 Male, age 74, both hemispheres 20.9
2530 Female, age 94, left hemisphere 19.6
2246 Female, age 85, both hemispheres 19.2
Entorhinal gyrus
nTPM: 16.9
2764 Male, age 80, right hemisphere 20.5
1938 Female, age 85, left hemisphere 17.0
1787 Male, age 76, left hemisphere 16.3
2117 Female, age 91, right hemisphere 16.2
2686 Male, age 75, right hemisphere 16.2
2613 Female, age 94, left hemisphere 15.2
Hippocampus, CA1
nTPM: 25.9
2749 Male, age 80, left hemisphere 42.0
1873 Female, age 85, both hemispheres 27.9
2045 Male, age 76, both hemispheres 22.2
2527 Male, age 74, both hemispheres 21.0
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 21.8
1963 Male, age 80, left hemisphere 33.3
1892 Male, age 76, both hemispheres 30.8
2249 Male, age 74, both hemispheres 19.1
2437 Female, age 94, left hemisphere 17.0
2113 Female, age 91, right hemisphere 16.4
1940 Female, age 85, left hemisphere 14.4
Hippocampus, CA3
nTPM: 22.1
2137 Male, age 80, left hemisphere 25.9
1867 Male, age 76, both hemispheres 25.2
2620 Female, age 94, left hemisphere 24.7
2436 Male, age 74, both hemispheres 19.7
2861 Female, age 67, both hemispheres 18.9
1891 Female, age 85, both hemispheres 18.0
Parahippocampal cortex
nTPM: 17.8
2250 Female, age 67, right hemisphere 19.7
1850 Male, age 80, both hemispheres 19.1
2245 Female, age 91, both hemispheres 19.1
1933 Female, age 85, both hemispheres 19.0
1990 Female, age 91, right hemisphere 18.2
2692 Male, age 74, both hemispheres 17.3
2693 Female, age 94, both hemispheres 17.2
2532 Female, age 72, left hemisphere 17.0
2018 Male, age 76, both hemispheres 16.5
2622 Female, age 67, right hemisphere 14.4
Perirhinal gyrus
nTPM: 19.0
1847 Female, age 91, left hemisphere 22.4
1794 Male, age 80, right hemisphere 19.5
2521 Female, age 94, right hemisphere 19.5
1841 Female, age 85, right hemisphere 17.7
2848 Male, age 76, right hemisphere 15.7
Subiculum
nTPM: 17.9
1977 Female, age 85, both hemispheres 21.1
1901 Male, age 80, both hemispheres 19.1
2729 Female, age 91, right hemisphere 17.3
2438 Female, age 94, left hemisphere 17.2
2619 Male, age 74, both hemispheres 16.4
2042 Male, age 76, both hemispheres 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.5
Samples: 197

Max nTPM: 62.3
Min nTPM: 13.1
Std nTPM: 10.1
Median nTPM: 23.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 62.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 56.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 56.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 54.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 52.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 49.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 48.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 46.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 46.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.3
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 62.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.2
Samples: 4

Max nTPM: 74.9
Min nTPM: 42.8
Sample A Female 74.9
Sample B Female 60.3
Sample C Male 50.7
Sample D Male 42.8
Entorhinal cortex
nTPM: 55.6
Samples: 4

Max nTPM: 59.3
Min nTPM: 48.8
Sample A Female 59.3
Sample B Female 56.0
Sample C Male 58.2
Sample D Male 48.8
Subiculum
nTPM: 56.4
Samples: 4

Max nTPM: 74.0
Min nTPM: 46.0
Sample A Female 74.0
Sample B Female 48.6
Sample C Male 57.0
Sample D Male 46.0
Ventral hippocampus
nTPM: 57.6
Samples: 4

Max nTPM: 67.3
Min nTPM: 40.7
Sample A Female 64.6
Sample B Female 40.7
Sample C Male 67.3
Sample D Male 57.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.2
Samples: 4

Max nTPM: 126.8
Min nTPM: 100.6
Sample A Male 100.6
Sample B Male 106.0
Sample C Female 107.2
Sample D Female 126.8
Hippocampal formation
nTPM: 113.1
Samples: 4

Max nTPM: 123.8
Min nTPM: 100.8
Sample A Male 112.1
Sample B Male 115.8
Sample C Female 123.8
Sample D Female 100.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74822941 Antisense, RP_060321_01_B02, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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