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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:50.1 nTPM
HPA:50.1 nTPM
GTEx:36.5 nTPM
FANTOM5:88.7 Scaled Tags Per Million
Pig:121.6 nTPM
Mouse:101.6 nTPM
Allen mouse:19.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037256
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.1
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
1898 Male, age 80, left hemisphere 55.7
1855 Male, age 76, left hemisphere 39.4
2621 Female, age 67, right hemisphere 39.2
2529 Female, age 94, left hemisphere 34.6
2148 Female, age 91, left hemisphere 31.4
1911 Female, age 85, right hemisphere 30.7
Dentate gyrus
nTPM: 39.0
2010 Male, age 76, both hemispheres 47.4
1927 Female, age 91, both hemispheres 46.6
2530 Female, age 94, left hemisphere 41.5
2246 Female, age 85, both hemispheres 35.2
2531 Female, age 67, both hemispheres 31.9
2528 Male, age 74, both hemispheres 31.2
Entorhinal gyrus
nTPM: 40.7
2764 Male, age 80, right hemisphere 49.7
1938 Female, age 85, left hemisphere 47.9
1787 Male, age 76, left hemisphere 39.6
2613 Female, age 94, left hemisphere 38.8
2686 Male, age 75, right hemisphere 35.1
2117 Female, age 91, right hemisphere 32.8
Hippocampus, CA1
nTPM: 45.4
2749 Male, age 80, left hemisphere 76.4
2045 Male, age 76, both hemispheres 43.1
1873 Female, age 85, both hemispheres 42.7
2527 Male, age 74, both hemispheres 34.7
2082 Female, age 91, right hemisphere 29.8
Hippocampus, CA2
nTPM: 38.7
1963 Male, age 80, left hemisphere 55.2
1892 Male, age 76, both hemispheres 51.0
2437 Female, age 94, left hemisphere 34.9
2249 Male, age 74, both hemispheres 33.6
2113 Female, age 91, right hemisphere 29.0
1940 Female, age 85, left hemisphere 28.2
Hippocampus, CA3
nTPM: 41.4
2137 Male, age 80, left hemisphere 60.6
1867 Male, age 76, both hemispheres 44.4
2620 Female, age 94, left hemisphere 39.9
1891 Female, age 85, both hemispheres 35.5
2436 Male, age 74, both hemispheres 35.5
2861 Female, age 67, both hemispheres 32.5
Parahippocampal cortex
nTPM: 38.1
1850 Male, age 80, both hemispheres 57.0
1933 Female, age 85, both hemispheres 42.1
1990 Female, age 91, right hemisphere 40.9
2018 Male, age 76, both hemispheres 40.3
2245 Female, age 91, both hemispheres 37.6
2532 Female, age 72, left hemisphere 37.1
2250 Female, age 67, right hemisphere 35.7
2693 Female, age 94, both hemispheres 33.5
2692 Male, age 74, both hemispheres 31.0
2622 Female, age 67, right hemisphere 25.8
Perirhinal gyrus
nTPM: 50.1
1847 Female, age 91, left hemisphere 60.3
1794 Male, age 80, right hemisphere 57.5
1841 Female, age 85, right hemisphere 50.6
2848 Male, age 76, right hemisphere 41.6
2521 Female, age 94, right hemisphere 40.6
Subiculum
nTPM: 34.7
1901 Male, age 80, both hemispheres 43.4
1977 Female, age 85, both hemispheres 42.8
2042 Male, age 76, both hemispheres 35.3
2619 Male, age 74, both hemispheres 30.0
2438 Female, age 94, left hemisphere 29.3
2729 Female, age 91, right hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.5
Samples: 197

Max nTPM: 64.5
Min nTPM: 17.5
Std nTPM: 9.7
Median nTPM: 34.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 64.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 63.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 61.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 59.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 58.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 57.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 56.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 56.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 56.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 55.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.7
FF:10153-102I9 76 years, female 89.6
FF:10169-103B7 60 years, female 87.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 121.6
Samples: 4

Max nTPM: 154.1
Min nTPM: 97.9
Sample A Female 154.1
Sample B Female 123.0
Sample C Male 111.4
Sample D Male 97.9
Entorhinal cortex
nTPM: 108.7
Samples: 4

Max nTPM: 117.9
Min nTPM: 92.6
Sample A Female 109.0
Sample B Female 117.9
Sample C Male 115.4
Sample D Male 92.6
Subiculum
nTPM: 110.9
Samples: 4

Max nTPM: 140.6
Min nTPM: 99.7
Sample A Female 140.6
Sample B Female 101.2
Sample C Male 102.0
Sample D Male 99.7
Ventral hippocampus
nTPM: 106.6
Samples: 4

Max nTPM: 120.2
Min nTPM: 82.7
Sample A Female 120.2
Sample B Female 82.7
Sample C Male 114.5
Sample D Male 109.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.0
Samples: 4

Max nTPM: 97.6
Min nTPM: 91.6
Sample A Male 93.3
Sample B Male 93.3
Sample C Female 91.6
Sample D Female 97.6
Hippocampal formation
nTPM: 101.7
Samples: 4

Max nTPM: 112.7
Min nTPM: 92.5
Sample A Male 92.5
Sample B Male 103.7
Sample C Female 112.7
Sample D Female 97.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
67814217 Antisense, RP_040920_01_G05, Mouse strain C57BL/6J (56 days, male) 19.9

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The Human Protein Atlas

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