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HILPDA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:26.6 nTPM
FANTOM5:137.9 Scaled Tags Per Million
Mouse:10.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010515
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
1855 Male, age 76, left hemisphere 20.5
2148 Female, age 91, left hemisphere 14.8
1898 Male, age 80, left hemisphere 14.4
1911 Female, age 85, right hemisphere 13.2
2621 Female, age 67, right hemisphere 12.5
2529 Female, age 94, left hemisphere 11.8
Dentate gyrus
nTPM: 14.2
2010 Male, age 76, both hemispheres 20.7
2528 Male, age 74, both hemispheres 15.7
2246 Female, age 85, both hemispheres 13.3
2531 Female, age 67, both hemispheres 12.8
2530 Female, age 94, left hemisphere 11.9
1927 Female, age 91, both hemispheres 11.0
Entorhinal gyrus
nTPM: 12.2
1787 Male, age 76, left hemisphere 14.0
2686 Male, age 75, right hemisphere 13.3
2117 Female, age 91, right hemisphere 12.6
2613 Female, age 94, left hemisphere 11.5
1938 Female, age 85, left hemisphere 11.4
2764 Male, age 80, right hemisphere 10.6
Hippocampus, CA1
nTPM: 15.9
2045 Male, age 76, both hemispheres 20.5
2527 Male, age 74, both hemispheres 17.1
2082 Female, age 91, right hemisphere 16.2
1873 Female, age 85, both hemispheres 13.6
2749 Male, age 80, left hemisphere 11.9
Hippocampus, CA2
nTPM: 13.4
2249 Male, age 74, both hemispheres 20.2
1940 Female, age 85, left hemisphere 14.6
2113 Female, age 91, right hemisphere 13.2
2437 Female, age 94, left hemisphere 11.7
1963 Male, age 80, left hemisphere 11.2
1892 Male, age 76, both hemispheres 9.8
Hippocampus, CA3
nTPM: 13.6
2436 Male, age 74, both hemispheres 20.1
2137 Male, age 80, left hemisphere 12.7
2620 Female, age 94, left hemisphere 12.7
1891 Female, age 85, both hemispheres 12.6
2861 Female, age 67, both hemispheres 12.0
1867 Male, age 76, both hemispheres 11.8
Parahippocampal cortex
nTPM: 12.6
2018 Male, age 76, both hemispheres 19.1
2250 Female, age 67, right hemisphere 15.3
2692 Male, age 74, both hemispheres 13.9
2693 Female, age 94, both hemispheres 12.1
1933 Female, age 85, both hemispheres 11.5
2532 Female, age 72, left hemisphere 11.2
1990 Female, age 91, right hemisphere 11.0
2622 Female, age 67, right hemisphere 10.9
1850 Male, age 80, both hemispheres 10.6
2245 Female, age 91, both hemispheres 10.6
Perirhinal gyrus
nTPM: 10.8
1841 Female, age 85, right hemisphere 11.9
2521 Female, age 94, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.0
1794 Male, age 80, right hemisphere 10.4
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 14.3
2042 Male, age 76, both hemispheres 17.9
2729 Female, age 91, right hemisphere 16.0
2619 Male, age 74, both hemispheres 14.0
2438 Female, age 94, left hemisphere 13.6
1901 Male, age 80, both hemispheres 12.4
1977 Female, age 85, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.6
Samples: 197

Max nTPM: 408.1
Min nTPM: 2.4
Std nTPM: 48.1
Median nTPM: 11.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 408.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 379.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 253.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 174.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 154.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 133.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 113.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 103.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 101.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 90.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 89.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 137.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 137.9
FF:10169-103B7 60 years, female 198.8
FF:10153-102I9 76 years, female 77.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.7
Sample A Male 11.1
Sample B Male 12.1
Sample C Female 8.7
Sample D Female 8.8
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.1
Sample A Male 11.6
Sample B Male 9.1
Sample C Female 8.1
Sample D Female 10.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.