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EPC2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:9.9 nTPM
HPA:9.9 nTPM
GTEx:9.9 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:29.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036759
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Hippocampus
nTPM: 8.0
1855 Male, age 76, left hemisphere 9.5
1911 Female, age 85, right hemisphere 8.2
2621 Female, age 67, right hemisphere 8.2
1898 Male, age 80, left hemisphere 7.6
2148 Female, age 91, left hemisphere 7.6
2529 Female, age 94, left hemisphere 7.3
Dentate gyrus
nTPM: 7.7
2246 Female, age 85, both hemispheres 8.9
1927 Female, age 91, both hemispheres 8.3
2531 Female, age 67, both hemispheres 8.0
2010 Male, age 76, both hemispheres 7.9
2528 Male, age 74, both hemispheres 6.7
2530 Female, age 94, left hemisphere 6.3
Entorhinal gyrus
nTPM: 8.8
1938 Female, age 85, left hemisphere 11.3
2117 Female, age 91, right hemisphere 9.1
1787 Male, age 76, left hemisphere 8.8
2686 Male, age 75, right hemisphere 8.4
2764 Male, age 80, right hemisphere 8.2
2613 Female, age 94, left hemisphere 6.8
Hippocampus, CA1
nTPM: 7.3
1873 Female, age 85, both hemispheres 8.0
2749 Male, age 80, left hemisphere 7.4
2045 Male, age 76, both hemispheres 7.1
2082 Female, age 91, right hemisphere 6.9
2527 Male, age 74, both hemispheres 6.9
Hippocampus, CA2
nTPM: 7.9
1892 Male, age 76, both hemispheres 9.0
2249 Male, age 74, both hemispheres 8.1
2113 Female, age 91, right hemisphere 8.0
1940 Female, age 85, left hemisphere 7.8
1963 Male, age 80, left hemisphere 7.4
2437 Female, age 94, left hemisphere 7.1
Hippocampus, CA3
nTPM: 8.2
1891 Female, age 85, both hemispheres 9.4
2620 Female, age 94, left hemisphere 9.4
1867 Male, age 76, both hemispheres 8.7
2137 Male, age 80, left hemisphere 8.2
2861 Female, age 67, both hemispheres 7.1
2436 Male, age 74, both hemispheres 6.3
Parahippocampal cortex
nTPM: 9.2
2693 Female, age 94, both hemispheres 11.2
2532 Female, age 72, left hemisphere 10.3
1850 Male, age 80, both hemispheres 9.8
1933 Female, age 85, both hemispheres 9.8
2250 Female, age 67, right hemisphere 9.4
1990 Female, age 91, right hemisphere 8.8
2245 Female, age 91, both hemispheres 8.5
2018 Male, age 76, both hemispheres 8.3
2622 Female, age 67, right hemisphere 8.1
2692 Male, age 74, both hemispheres 8.1
Perirhinal gyrus
nTPM: 9.9
1841 Female, age 85, right hemisphere 11.9
2848 Male, age 76, right hemisphere 10.4
1794 Male, age 80, right hemisphere 10.3
2521 Female, age 94, right hemisphere 9.0
1847 Female, age 91, left hemisphere 8.1
Subiculum
nTPM: 8.5
1977 Female, age 85, both hemispheres 9.6
2042 Male, age 76, both hemispheres 8.9
2619 Male, age 74, both hemispheres 8.6
2438 Female, age 94, left hemisphere 8.4
1901 Male, age 80, both hemispheres 8.1
2729 Female, age 91, right hemisphere 7.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 17.3
Min nTPM: 6.1
Std nTPM: 1.9
Median nTPM: 9.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 14.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 14.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 14.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 14.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 14.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 13.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 13.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 13.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10153-102I9 76 years, female 39.1
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.5
Sample A Female 20.7
Sample B Female 19.3
Sample C Male 21.5
Sample D Male 18.5
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.0
Sample A Female 20.8
Sample B Female 20.8
Sample C Male 20.1
Sample D Male 18.0
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 22.8
Min nTPM: 17.5
Sample A Female 22.8
Sample B Female 17.5
Sample C Male 18.7
Sample D Male 19.5
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 19.1
Min nTPM: 15.5
Sample A Female 18.1
Sample B Female 17.0
Sample C Male 15.5
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 31.9
Min nTPM: 27.8
Sample A Male 28.2
Sample B Male 31.9
Sample C Female 27.8
Sample D Female 28.9
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 32.1
Min nTPM: 21.8
Sample A Male 29.3
Sample B Male 32.1
Sample C Female 29.6
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70239111 Antisense, RP_050531_01_A01, Mouse strain C57BL/6J (56 days, male) 0.3

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