ABOUTMENU
HELP
NEWS
SRSF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:43.0 nTPM
HPA:43.0 nTPM
GTEx:52.9 nTPM
FANTOM5:99.3 Scaled Tags Per Million
Pig:58.4 nTPM
Mouse:56.3 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061301Antibody CAB013073
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.0
Sample id Sample description nTPM
Hippocampus
nTPM: 41.5
1898 Male, age 80, left hemisphere 44.3
2529 Female, age 94, left hemisphere 43.5
1911 Female, age 85, right hemisphere 41.1
1855 Male, age 76, left hemisphere 40.4
2148 Female, age 91, left hemisphere 40.1
2621 Female, age 67, right hemisphere 39.7
Dentate gyrus
nTPM: 41.9
1927 Female, age 91, both hemispheres 43.6
2010 Male, age 76, both hemispheres 41.9
2246 Female, age 85, both hemispheres 41.8
2528 Male, age 74, both hemispheres 41.7
2530 Female, age 94, left hemisphere 41.3
2531 Female, age 67, both hemispheres 40.9
Entorhinal gyrus
nTPM: 40.5
2117 Female, age 91, right hemisphere 45.0
1938 Female, age 85, left hemisphere 43.6
2686 Male, age 75, right hemisphere 40.4
2764 Male, age 80, right hemisphere 40.0
1787 Male, age 76, left hemisphere 39.6
2613 Female, age 94, left hemisphere 34.6
Hippocampus, CA1
nTPM: 42.9
1873 Female, age 85, both hemispheres 46.1
2749 Male, age 80, left hemisphere 45.9
2527 Male, age 74, both hemispheres 42.2
2045 Male, age 76, both hemispheres 40.6
2082 Female, age 91, right hemisphere 39.9
Hippocampus, CA2
nTPM: 41.9
1892 Male, age 76, both hemispheres 46.0
2249 Male, age 74, both hemispheres 43.4
1963 Male, age 80, left hemisphere 42.8
2113 Female, age 91, right hemisphere 40.8
1940 Female, age 85, left hemisphere 39.8
2437 Female, age 94, left hemisphere 38.9
Hippocampus, CA3
nTPM: 41.3
1867 Male, age 76, both hemispheres 45.9
2137 Male, age 80, left hemisphere 45.7
1891 Female, age 85, both hemispheres 42.1
2436 Male, age 74, both hemispheres 41.5
2861 Female, age 67, both hemispheres 39.3
2620 Female, age 94, left hemisphere 33.3
Parahippocampal cortex
nTPM: 40.3
1850 Male, age 80, both hemispheres 44.3
1990 Female, age 91, right hemisphere 41.8
1933 Female, age 85, both hemispheres 41.1
2692 Male, age 74, both hemispheres 40.5
2018 Male, age 76, both hemispheres 40.4
2250 Female, age 67, right hemisphere 40.4
2245 Female, age 91, both hemispheres 39.7
2693 Female, age 94, both hemispheres 39.5
2532 Female, age 72, left hemisphere 39.1
2622 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 43.0
1841 Female, age 85, right hemisphere 45.6
1794 Male, age 80, right hemisphere 43.2
2848 Male, age 76, right hemisphere 42.4
1847 Female, age 91, left hemisphere 42.2
2521 Female, age 94, right hemisphere 41.7
Subiculum
nTPM: 41.9
2438 Female, age 94, left hemisphere 43.6
1977 Female, age 85, both hemispheres 42.9
1901 Male, age 80, both hemispheres 42.6
2042 Male, age 76, both hemispheres 42.2
2729 Female, age 91, right hemisphere 40.5
2619 Male, age 74, both hemispheres 39.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 77.9
Min nTPM: 32.1
Std nTPM: 7.7
Median nTPM: 52.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 77.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 76.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 74.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 74.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 73.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 70.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 68.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 68.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 68.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 67.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.3
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 98.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.4
Samples: 4

Max nTPM: 68.8
Min nTPM: 50.8
Sample A Female 68.8
Sample B Female 55.9
Sample C Male 57.9
Sample D Male 50.8
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 50.4
Min nTPM: 42.1
Sample A Female 44.0
Sample B Female 50.4
Sample C Male 45.3
Sample D Male 42.1
Subiculum
nTPM: 50.5
Samples: 4

Max nTPM: 58.2
Min nTPM: 44.9
Sample A Female 58.2
Sample B Female 50.4
Sample C Male 44.9
Sample D Male 48.4
Ventral hippocampus
nTPM: 52.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 46.9
Sample A Female 55.3
Sample B Female 46.9
Sample C Male 51.3
Sample D Male 54.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.0
Samples: 4

Max nTPM: 57.3
Min nTPM: 44.7
Sample A Male 48.5
Sample B Male 53.3
Sample C Female 57.3
Sample D Female 44.7
Hippocampal formation
nTPM: 56.4
Samples: 4

Max nTPM: 57.6
Min nTPM: 54.5
Sample A Male 55.9
Sample B Male 57.6
Sample C Female 54.5
Sample D Female 57.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69873630 Antisense, RP_050512_01_F06, Mouse strain C57BL/6J (56 days, male) 3.7
70795778 Antisense, RP_050712_02_A01, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.