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MRPL47
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.8 nTPM
HPA:31.8 nTPM
GTEx:37.4 nTPM
FANTOM5:42.4 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:8.7 nTPM
Allen mouse:1.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 31.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 29.7
2019 Male, age 18, unknown 34.5
2411 Female, age 72, unknown 32.3
1827 Male, age 72, unknown 30.1
2219 Male, age 76, both hemispheres 30.1
1870 Female, age 42, unknown 29.3
1830 Male, age 51, unknown 29.1
2828 Female, age 72, unknown 29.0
1833 Male, age 53, unknown 28.3
2666 Male, age 74, left hemisphere 27.6
2586 Male, age 75, left hemisphere 27.0
Dorsal raphe nucleus
nTPM: 30.4
2298 Female, age 72, unknown 33.1
1828 Male, age 53, unknown 31.5
2750 Male, age 76, both hemispheres 29.8
2047 Male, age 72, unknown 29.0
2016 Female, age 72, unknown 28.8
Inferior colliculus
nTPM: 31.1
2097 Female, age 72, unknown 33.2
1890 Male, age 53, unknown 32.5
1848 Female, age 42, unknown 30.5
2849 Male, age 72, unknown 27.9
Median raphe nucleus
nTPM: 30.3
2220 Male, age 76, midline 30.3
Pedunculopontine tegmental nucleus
nTPM: 31.0
1921 Female, age 85, both hemispheres 31.7
2334 Male, age 80, both hemispheres 31.1
2338 Male, age 61, both hemispheres 30.1
Periaquaductal grey, anterior
nTPM: 30.5
2502 Female, age 75, unknown 31.6
1947 Male, age 18, unknown 30.2
1795 Male, age 51, unknown 29.7
Periaquaductal grey, dorsal
nTPM: 29.2
2464 Female, age 72, unknown 29.9
1840 Male, age 53, unknown 29.5
2850 Male, age 76, both hemispheres 28.8
1831 Male, age 72, unknown 28.7
Periaquaductal grey, lateral
nTPM: 29.6
2272 Male, age 74, both hemispheres 32.2
2140 Male, age 76, both hemispheres 29.0
2053 Male, age 18, unknown 27.7
Pretectal area
nTPM: 30.8
2007 Male, age 72, unknown 34.1
1817 Female, age 42, unknown 33.1
1944 Female, age 72, unknown 33.0
2273 Male, age 74, both hemispheres 32.1
1815 Male, age 53, unknown 31.2
1816 Male, age 51, unknown 31.2
2224 Female, age 72, unknown 30.2
2667 Female, age 75, unknown 29.9
2316 Male, age 76, right hemisphere 29.3
2825 Male, age 18, unknown 28.0
2407 Male, age 75, both hemispheres 27.3
Red nucleus
nTPM: 31.1
1821 Female, age 72, unknown 34.2
2725 Female, age 75, unknown 32.2
1865 Male, age 51, unknown 31.6
1954 Female, age 42, unknown 31.6
2785 Male, age 18, unknown 31.6
1904 Male, age 53, unknown 31.4
2227 Male, age 72, unknown 31.4
2503 Female, age 72, unknown 31.1
2823 Male, age 76, right hemisphere 30.9
2769 Male, age 72, unknown 30.6
2588 Male, age 74, left hemisphere 28.8
2584 Male, age 75, left hemisphere 27.7
Substantia nigra
nTPM: 31.8
1916 Female, age 42, unknown 35.0
2241 Male, age 72, unknown 34.2
1889 Female, age 72, unknown 33.8
1851 Male, age 51, unknown 33.1
2409 Female, age 72, unknown 32.2
1941 Male, age 53, unknown 31.9
2699 Male, age 18, unknown 30.5
2590 Female, age 75, unknown 30.3
2665 Male, age 74, both hemispheres 29.3
2583 Male, age 75, right hemisphere 28.0
Superior colliculus
nTPM: 29.8
2587 Male, age 74, left hemisphere 31.9
2087 Female, age 72, unknown 31.7
2261 Male, age 18, unknown 31.1
1895 Male, age 76, right hemisphere 29.9
1796 Male, age 53, unknown 29.7
2668 Female, age 75, unknown 29.6
1913 Female, age 42, unknown 29.3
1995 Male, age 72, unknown 29.3
1839 Male, age 51, unknown 29.2
2664 Male, age 75, both hemispheres 26.4
Ventral tegmental area
nTPM: 31.4
2410 Female, age 72, unknown 33.0
1915 Female, age 42, unknown 32.7
2218 Male, age 76, both hemispheres 32.2
2223 Female, age 72, unknown 31.0
1942 Male, age 51, unknown 30.8
2021 Male, age 53, unknown 28.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 37.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 37.4
Samples: 139

Max nTPM: 57.7
Min nTPM: 23.2
Std nTPM: 7.5
Median nTPM: 35.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 57.7
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 57.4
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 54.9
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 54.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 54.3
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 52.8
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 52.7
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 52.1
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 52.0
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 51.9
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 51.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 42.4
FF:10158-103A5 76 years, female 42.4

MIDBRAIN - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Midbrain
nTPM: 14.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.3
Sample A Female 12.9
Sample B Female 15.1
Sample C Male 17.1
Sample D Male 11.3
Periaqueductal gray
nTPM: 12.6
Samples: 3

Max nTPM: 14.4
Min nTPM: 9.6
Sample B Female 13.9
Sample C Male 14.4
Sample D Male 9.6
Substantia nigra
nTPM: 12.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 8.6
Sample A Female 13.5
Sample B Female 13.6
Sample C Male 15.5
Sample D Male 8.6
Superior colliculi
nTPM: 14.7
Samples: 4

Max nTPM: 20.3
Min nTPM: 10.7
Sample A Female 14.5
Sample B Female 13.2
Sample C Male 20.3
Sample D Male 10.7

MIDBRAIN - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 8.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 9.2
Sample C Female 9.2
Sample D Female 8.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.0
71020791 Antisense, RP_050505_01_G07, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.