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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:156.2 nTPM
HPA:156.2 nTPM
GTEx:160.9 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:107.5 nTPM
Mouse:115.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047478Antibody HPA055752Antibody CAB008678
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedNot detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.2
Sample id Sample description nTPM
Hippocampus
nTPM: 149.4
1898 Male, age 80, left hemisphere 163.1
1855 Male, age 76, left hemisphere 149.9
2621 Female, age 67, right hemisphere 148.1
2529 Female, age 94, left hemisphere 148.0
1911 Female, age 85, right hemisphere 146.8
2148 Female, age 91, left hemisphere 140.3
Dentate gyrus
nTPM: 148.1
2010 Male, age 76, both hemispheres 155.7
1927 Female, age 91, both hemispheres 153.0
2246 Female, age 85, both hemispheres 147.0
2530 Female, age 94, left hemisphere 146.2
2528 Male, age 74, both hemispheres 146.0
2531 Female, age 67, both hemispheres 140.5
Entorhinal gyrus
nTPM: 148.0
1938 Female, age 85, left hemisphere 153.3
2764 Male, age 80, right hemisphere 152.2
1787 Male, age 76, left hemisphere 148.3
2613 Female, age 94, left hemisphere 145.4
2117 Female, age 91, right hemisphere 145.2
2686 Male, age 75, right hemisphere 143.6
Hippocampus, CA1
nTPM: 154.9
2749 Male, age 80, left hemisphere 168.2
2045 Male, age 76, both hemispheres 155.2
2527 Male, age 74, both hemispheres 154.4
1873 Female, age 85, both hemispheres 149.9
2082 Female, age 91, right hemisphere 146.8
Hippocampus, CA2
nTPM: 151.2
1892 Male, age 76, both hemispheres 159.3
2249 Male, age 74, both hemispheres 158.5
1963 Male, age 80, left hemisphere 154.0
2437 Female, age 94, left hemisphere 146.2
1940 Female, age 85, left hemisphere 145.1
2113 Female, age 91, right hemisphere 143.9
Hippocampus, CA3
nTPM: 149.1
1867 Male, age 76, both hemispheres 158.2
2137 Male, age 80, left hemisphere 157.9
2436 Male, age 74, both hemispheres 149.2
1891 Female, age 85, both hemispheres 148.8
2620 Female, age 94, left hemisphere 142.4
2861 Female, age 67, both hemispheres 138.3
Parahippocampal cortex
nTPM: 149.5
1850 Male, age 80, both hemispheres 157.5
2250 Female, age 67, right hemisphere 155.4
1933 Female, age 85, both hemispheres 153.6
2018 Male, age 76, both hemispheres 152.8
2245 Female, age 91, both hemispheres 150.5
1990 Female, age 91, right hemisphere 148.7
2693 Female, age 94, both hemispheres 146.7
2532 Female, age 72, left hemisphere 146.5
2692 Male, age 74, both hemispheres 145.5
2622 Female, age 67, right hemisphere 137.4
Perirhinal gyrus
nTPM: 156.2
1847 Female, age 91, left hemisphere 163.2
1841 Female, age 85, right hemisphere 159.8
1794 Male, age 80, right hemisphere 156.8
2521 Female, age 94, right hemisphere 152.7
2848 Male, age 76, right hemisphere 148.5
Subiculum
nTPM: 148.4
1977 Female, age 85, both hemispheres 155.3
1901 Male, age 80, both hemispheres 153.5
2042 Male, age 76, both hemispheres 151.7
2619 Male, age 74, both hemispheres 145.8
2729 Female, age 91, right hemisphere 144.0
2438 Female, age 94, left hemisphere 140.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 160.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 160.9
Samples: 197

Max nTPM: 535.3
Min nTPM: 82.9
Std nTPM: 48.3
Median nTPM: 157.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 535.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 330.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 311.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 271.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 252.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 244.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 240.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 237.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 237.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 236.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 232.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.2
FF:10169-103B7 60 years, female 96.2
FF:10153-102I9 76 years, female 44.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 107.5
Samples: 4

Max nTPM: 140.6
Min nTPM: 87.5
Sample A Female 140.6
Sample B Female 108.5
Sample C Male 93.3
Sample D Male 87.5
Entorhinal cortex
nTPM: 97.8
Samples: 4

Max nTPM: 130.5
Min nTPM: 65.3
Sample A Female 97.3
Sample B Female 130.5
Sample C Male 98.1
Sample D Male 65.3
Subiculum
nTPM: 98.1
Samples: 4

Max nTPM: 129.0
Min nTPM: 76.1
Sample A Female 129.0
Sample B Female 93.9
Sample C Male 76.1
Sample D Male 93.2
Ventral hippocampus
nTPM: 95.2
Samples: 4

Max nTPM: 109.5
Min nTPM: 80.7
Sample A Female 109.5
Sample B Female 90.9
Sample C Male 99.7
Sample D Male 80.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.7
Samples: 4

Max nTPM: 120.8
Min nTPM: 104.6
Sample A Male 104.6
Sample B Male 117.7
Sample C Female 120.8
Sample D Female 111.5
Hippocampal formation
nTPM: 115.9
Samples: 4

Max nTPM: 133.6
Min nTPM: 104.7
Sample A Male 133.6
Sample B Male 104.7
Sample C Female 112.5
Sample D Female 112.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
73573289 Antisense, RP_051121_03_F10, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

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