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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:15.5 nTPM
FANTOM5:21.3 Scaled Tags Per Million
Pig:6.8 nTPM
Mouse:33.5 nTPM
Allen mouse:0.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Amygdala
nTPM: 13.3
2814 Male, age 76, right hemisphere 15.0
1987 Female, age 91, left hemisphere 13.5
2514 Male, age 75, right hemisphere 13.0
2695 Female, age 67, right hemisphere 12.8
2517 Female, age 94, left hemisphere 12.4
Basal amygdala
nTPM: 12.8
2243 Female, age 91, right hemisphere 13.4
2609 Male, age 75, right hemisphere 13.4
1955 Male, age 76, both hemispheres 13.2
2110 Male, age 80, left hemisphere 13.0
2685 Female, age 94, left hemisphere 12.7
2827 Female, age 67, right hemisphere 10.9
Central amygdala
nTPM: 13.1
1905 Male, age 76, both hemispheres 14.1
2239 Male, age 80, left hemisphere 13.3
2515 Male, age 75, right hemisphere 12.9
2701 Female, age 91, right hemisphere 12.7
2826 Female, age 94, left hemisphere 12.6
Corticomedial amygdala
nTPM: 13.1
2829 Male, age 80, left hemisphere 13.8
2429 Female, age 94, left hemisphere 13.7
2428 Male, age 75, right hemisphere 13.5
2242 Female, age 91, right hemisphere 13.4
2240 Male, age 76, both hemispheres 13.3
2535 Female, age 67, right hemisphere 11.1
Lateral amygdala
nTPM: 12.6
1883 Male, age 76, both hemispheres 13.6
2516 Male, age 75, right hemisphere 13.2
2534 Female, age 94, left hemisphere 13.2
2255 Female, age 91, right hemisphere 12.4
2256 Male, age 80, left hemisphere 11.9
2830 Female, age 67, right hemisphere 11.4
Stria terminalis, bed nucleus
nTPM: 14.3
2486 Female, age 94, both hemispheres 14.9
1974 Female, age 91, both hemispheres 14.6
2201 Male, age 74, unknown 13.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 15.5
Samples: 152

Max nTPM: 26.5
Min nTPM: 9.5
Std nTPM: 2.7
Median nTPM: 15.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 26.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 22.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 22.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 22.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 21.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 21.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 21.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 21.1
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 20.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 20.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 20.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 21.3
FF:10151-102I7 76 years, female 21.3

AMYGDALA - Pig RNA-seqi
Average nTPM 6.8
Pig sample Sample description nTPM
Amygdala
nTPM: 6.8
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.6
Sample A Female 7.7
Sample B Female 6.5
Sample C Male 5.6
Sample D Male 7.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 33.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 33.5
Samples: 4

Max nTPM: 36.8
Min nTPM: 29.4
Sample A Male 34.7
Sample B Male 36.8
Sample C Female 29.4
Sample D Female 32.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.6
686200 Antisense, RP_040916_01_A08, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.