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ZNF189
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.8 nTPM
HPA:27.8 nTPM
GTEx:23.3 nTPM
FANTOM5:39.5 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:17.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034814
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.1
1898 Male, age 80, left hemisphere 27.0
1911 Female, age 85, right hemisphere 25.9
2621 Female, age 67, right hemisphere 24.8
1855 Male, age 76, left hemisphere 24.6
2148 Female, age 91, left hemisphere 23.2
2529 Female, age 94, left hemisphere 18.9
Dentate gyrus
nTPM: 21.3
1927 Female, age 91, both hemispheres 30.1
2010 Male, age 76, both hemispheres 25.5
2246 Female, age 85, both hemispheres 20.6
2531 Female, age 67, both hemispheres 18.6
2530 Female, age 94, left hemisphere 17.0
2528 Male, age 74, both hemispheres 15.7
Entorhinal gyrus
nTPM: 13.8
2764 Male, age 80, right hemisphere 15.3
2117 Female, age 91, right hemisphere 14.2
1787 Male, age 76, left hemisphere 13.5
1938 Female, age 85, left hemisphere 13.3
2686 Male, age 75, right hemisphere 13.3
2613 Female, age 94, left hemisphere 13.2
Hippocampus, CA1
nTPM: 27.8
2749 Male, age 80, left hemisphere 51.8
1873 Female, age 85, both hemispheres 25.9
2045 Male, age 76, both hemispheres 21.8
2527 Male, age 74, both hemispheres 19.9
2082 Female, age 91, right hemisphere 19.5
Hippocampus, CA2
nTPM: 21.9
1963 Male, age 80, left hemisphere 32.1
1892 Male, age 76, both hemispheres 27.5
2113 Female, age 91, right hemisphere 20.8
2249 Male, age 74, both hemispheres 20.8
1940 Female, age 85, left hemisphere 17.8
2437 Female, age 94, left hemisphere 12.4
Hippocampus, CA3
nTPM: 25.3
2137 Male, age 80, left hemisphere 50.0
1867 Male, age 76, both hemispheres 25.9
2620 Female, age 94, left hemisphere 20.4
1891 Female, age 85, both hemispheres 20.3
2436 Male, age 74, both hemispheres 18.0
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 16.4
2245 Female, age 91, both hemispheres 22.6
2693 Female, age 94, both hemispheres 19.0
1850 Male, age 80, both hemispheres 18.8
2018 Male, age 76, both hemispheres 17.3
2532 Female, age 72, left hemisphere 16.1
2250 Female, age 67, right hemisphere 15.3
1933 Female, age 85, both hemispheres 14.8
1990 Female, age 91, right hemisphere 13.9
2692 Male, age 74, both hemispheres 13.3
2622 Female, age 67, right hemisphere 13.2
Perirhinal gyrus
nTPM: 19.1
2521 Female, age 94, right hemisphere 25.1
1794 Male, age 80, right hemisphere 19.8
1841 Female, age 85, right hemisphere 18.8
1847 Female, age 91, left hemisphere 18.0
2848 Male, age 76, right hemisphere 13.7
Subiculum
nTPM: 18.2
1901 Male, age 80, both hemispheres 29.1
2042 Male, age 76, both hemispheres 21.7
2729 Female, age 91, right hemisphere 17.3
1977 Female, age 85, both hemispheres 15.1
2438 Female, age 94, left hemisphere 13.9
2619 Male, age 74, both hemispheres 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 62.1
Min nTPM: 8.2
Std nTPM: 8.8
Median nTPM: 22.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 62.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 46.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 42.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 41.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 40.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 39.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 39.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.5
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 34.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 36.0
Min nTPM: 18.4
Sample A Female 36.0
Sample B Female 35.1
Sample C Male 18.4
Sample D Male 31.7
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.0
Sample A Female 8.9
Sample B Female 10.5
Sample C Male 7.5
Sample D Male 7.0
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.8
Sample A Female 10.5
Sample B Female 7.9
Sample C Male 6.8
Sample D Male 8.3
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 33.6
Min nTPM: 10.4
Sample A Female 19.0
Sample B Female 12.2
Sample C Male 10.4
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 9.3
Min nTPM: 5.2
Sample A Male 6.1
Sample B Male 6.9
Sample C Female 9.3
Sample D Female 5.2
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.5
Min nTPM: 15.2
Sample A Male 16.3
Sample B Male 19.5
Sample C Female 19.4
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76098386 Antisense, RP_060626_01_F11, Mouse strain C57BL/6J (56 days, male) 0.4
79490078 Antisense, RP_070205_01_E10, Mouse strain C57BL/6J (56 days, male) 0.2
77414121 Antisense, RP_070205_01_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.