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FAM8A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:17.4 nTPM
HPA:17.4 nTPM
GTEx:15.4 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:58.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073675
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
1898 Male, age 80, left hemisphere 18.5
1855 Male, age 76, left hemisphere 16.3
1911 Female, age 85, right hemisphere 16.3
2529 Female, age 94, left hemisphere 15.2
2621 Female, age 67, right hemisphere 14.9
2148 Female, age 91, left hemisphere 13.2
Dentate gyrus
nTPM: 16.0
1927 Female, age 91, both hemispheres 18.4
2530 Female, age 94, left hemisphere 17.7
2010 Male, age 76, both hemispheres 17.0
2246 Female, age 85, both hemispheres 15.2
2528 Male, age 74, both hemispheres 14.9
2531 Female, age 67, both hemispheres 13.0
Entorhinal gyrus
nTPM: 14.0
1938 Female, age 85, left hemisphere 16.6
1787 Male, age 76, left hemisphere 14.4
2117 Female, age 91, right hemisphere 14.4
2764 Male, age 80, right hemisphere 14.0
2613 Female, age 94, left hemisphere 13.3
2686 Male, age 75, right hemisphere 11.1
Hippocampus, CA1
nTPM: 17.4
2749 Male, age 80, left hemisphere 22.2
1873 Female, age 85, both hemispheres 18.3
2045 Male, age 76, both hemispheres 17.7
2527 Male, age 74, both hemispheres 15.7
2082 Female, age 91, right hemisphere 13.2
Hippocampus, CA2
nTPM: 16.4
1892 Male, age 76, both hemispheres 19.6
1963 Male, age 80, left hemisphere 17.6
2249 Male, age 74, both hemispheres 17.3
1940 Female, age 85, left hemisphere 15.0
2437 Female, age 94, left hemisphere 15.0
2113 Female, age 91, right hemisphere 13.7
Hippocampus, CA3
nTPM: 16.3
2137 Male, age 80, left hemisphere 19.6
1867 Male, age 76, both hemispheres 17.9
2620 Female, age 94, left hemisphere 16.6
1891 Female, age 85, both hemispheres 16.1
2436 Male, age 74, both hemispheres 14.7
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 14.3
1850 Male, age 80, both hemispheres 16.5
1990 Female, age 91, right hemisphere 15.8
1933 Female, age 85, both hemispheres 15.5
2245 Female, age 91, both hemispheres 14.8
2250 Female, age 67, right hemisphere 14.6
2532 Female, age 72, left hemisphere 13.9
2693 Female, age 94, both hemispheres 13.6
2692 Male, age 74, both hemispheres 13.3
2018 Male, age 76, both hemispheres 13.0
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 15.8
1841 Female, age 85, right hemisphere 16.7
1847 Female, age 91, left hemisphere 16.5
1794 Male, age 80, right hemisphere 16.0
2521 Female, age 94, right hemisphere 14.8
2848 Male, age 76, right hemisphere 14.8
Subiculum
nTPM: 15.0
1901 Male, age 80, both hemispheres 16.8
1977 Female, age 85, both hemispheres 16.0
2042 Male, age 76, both hemispheres 15.8
2619 Male, age 74, both hemispheres 14.3
2438 Female, age 94, left hemisphere 13.7
2729 Female, age 91, right hemisphere 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.4
Samples: 197

Max nTPM: 23.2
Min nTPM: 8.7
Std nTPM: 3.0
Median nTPM: 15.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 22.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 21.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 21.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 20.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.2
FF:10153-102I9 76 years, female 50.4
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 13.2
Sample A Female 17.2
Sample B Female 17.5
Sample C Male 16.4
Sample D Male 13.2
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.8
Sample A Female 14.9
Sample B Female 15.6
Sample C Male 15.8
Sample D Male 12.8
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 18.6
Min nTPM: 14.0
Sample A Female 18.6
Sample B Female 14.6
Sample C Male 14.0
Sample D Male 15.3
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.4
Sample A Female 13.4
Sample B Female 13.7
Sample C Male 13.4
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.7
Samples: 4

Max nTPM: 61.8
Min nTPM: 56.5
Sample A Male 56.5
Sample B Male 59.4
Sample C Female 57.0
Sample D Female 61.8
Hippocampal formation
nTPM: 52.9
Samples: 4

Max nTPM: 56.4
Min nTPM: 48.3
Sample A Male 55.5
Sample B Male 56.4
Sample C Female 51.3
Sample D Female 48.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71213235 Antisense, RP_050816_04_B04, Mouse strain C57BL/6J (56 days, male) 0.2

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