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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:20.6 nTPM
FANTOM5:82.7 Scaled Tags Per Million
Pig:10.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036132Antibody HPA036133
Glial cells HighNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.0
1898 Male, age 80, left hemisphere 24.7
1911 Female, age 85, right hemisphere 21.8
2621 Female, age 67, right hemisphere 21.7
2529 Female, age 94, left hemisphere 21.4
2148 Female, age 91, left hemisphere 21.1
1855 Male, age 76, left hemisphere 21.0
Dentate gyrus
nTPM: 21.4
1927 Female, age 91, both hemispheres 22.9
2010 Male, age 76, both hemispheres 22.4
2246 Female, age 85, both hemispheres 21.8
2528 Male, age 74, both hemispheres 21.1
2531 Female, age 67, both hemispheres 20.1
2530 Female, age 94, left hemisphere 20.0
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 22.3
1787 Male, age 76, left hemisphere 22.0
2764 Male, age 80, right hemisphere 22.0
2117 Female, age 91, right hemisphere 21.2
2686 Male, age 75, right hemisphere 20.1
2613 Female, age 94, left hemisphere 17.9
Hippocampus, CA1
nTPM: 22.2
2749 Male, age 80, left hemisphere 23.5
2527 Male, age 74, both hemispheres 23.3
1873 Female, age 85, both hemispheres 22.9
2045 Male, age 76, both hemispheres 21.3
2082 Female, age 91, right hemisphere 19.8
Hippocampus, CA2
nTPM: 21.7
1892 Male, age 76, both hemispheres 23.0
1963 Male, age 80, left hemisphere 22.8
2249 Male, age 74, both hemispheres 22.5
1940 Female, age 85, left hemisphere 20.9
2113 Female, age 91, right hemisphere 20.7
2437 Female, age 94, left hemisphere 20.6
Hippocampus, CA3
nTPM: 21.1
2436 Male, age 74, both hemispheres 22.8
2137 Male, age 80, left hemisphere 22.6
1867 Male, age 76, both hemispheres 22.4
1891 Female, age 85, both hemispheres 21.9
2620 Female, age 94, left hemisphere 19.6
2861 Female, age 67, both hemispheres 17.6
Parahippocampal cortex
nTPM: 22.3
1850 Male, age 80, both hemispheres 25.3
2532 Female, age 72, left hemisphere 23.2
2250 Female, age 67, right hemisphere 23.1
1990 Female, age 91, right hemisphere 23.0
1933 Female, age 85, both hemispheres 22.7
2018 Male, age 76, both hemispheres 22.6
2245 Female, age 91, both hemispheres 21.9
2693 Female, age 94, both hemispheres 21.2
2692 Male, age 74, both hemispheres 20.4
2622 Female, age 67, right hemisphere 19.8
Perirhinal gyrus
nTPM: 23.6
1847 Female, age 91, left hemisphere 24.8
1841 Female, age 85, right hemisphere 24.5
1794 Male, age 80, right hemisphere 23.5
2521 Female, age 94, right hemisphere 23.2
2848 Male, age 76, right hemisphere 22.0
Subiculum
nTPM: 21.0
1977 Female, age 85, both hemispheres 22.8
2438 Female, age 94, left hemisphere 21.8
2619 Male, age 74, both hemispheres 21.6
2042 Male, age 76, both hemispheres 20.3
1901 Male, age 80, both hemispheres 20.1
2729 Female, age 91, right hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 43.4
Min nTPM: 11.1
Std nTPM: 3.9
Median nTPM: 20.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 30.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 29.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 28.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 28.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 27.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 27.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 27.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 26.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.7
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 81.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.3
Sample A Female 12.6
Sample B Female 10.6
Sample C Male 9.3
Sample D Male 10.0
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.0
Sample A Female 9.5
Sample B Female 9.9
Sample C Male 8.0
Sample D Male 8.6
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 12.7
Sample B Female 8.5
Sample C Male 8.2
Sample D Male 9.8
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.2
Sample A Female 12.3
Sample B Female 8.2
Sample C Male 9.3
Sample D Male 13.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.