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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:60.7 nTPM
HPA:60.7 nTPM
GTEx:79.9 nTPM
FANTOM5:172.7 Scaled Tags Per Million
Pig:75.4 nTPM
Mouse:100.4 nTPM
Allen mouse:18.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004911
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Hippocampus
nTPM: 60.7
2529 Female, age 94, left hemisphere 67.0
2621 Female, age 67, right hemisphere 64.9
2148 Female, age 91, left hemisphere 62.1
1911 Female, age 85, right hemisphere 56.8
1855 Male, age 76, left hemisphere 56.7
1898 Male, age 80, left hemisphere 56.5
Dentate gyrus
nTPM: 55.9
2531 Female, age 67, both hemispheres 61.0
2246 Female, age 85, both hemispheres 59.4
2530 Female, age 94, left hemisphere 59.3
1927 Female, age 91, both hemispheres 53.8
2010 Male, age 76, both hemispheres 52.3
2528 Male, age 74, both hemispheres 49.7
Entorhinal gyrus
nTPM: 56.6
2686 Male, age 75, right hemisphere 60.6
1938 Female, age 85, left hemisphere 59.1
2117 Female, age 91, right hemisphere 57.5
1787 Male, age 76, left hemisphere 54.4
2613 Female, age 94, left hemisphere 54.1
2764 Male, age 80, right hemisphere 53.7
Hippocampus, CA1
nTPM: 56.7
1873 Female, age 85, both hemispheres 59.8
2045 Male, age 76, both hemispheres 58.8
2527 Male, age 74, both hemispheres 58.2
2749 Male, age 80, left hemisphere 56.0
2082 Female, age 91, right hemisphere 50.6
Hippocampus, CA2
nTPM: 53.4
1892 Male, age 76, both hemispheres 58.4
2113 Female, age 91, right hemisphere 55.0
2437 Female, age 94, left hemisphere 54.7
1940 Female, age 85, left hemisphere 52.0
2249 Male, age 74, both hemispheres 51.5
1963 Male, age 80, left hemisphere 48.7
Hippocampus, CA3
nTPM: 58.5
1891 Female, age 85, both hemispheres 62.0
2137 Male, age 80, left hemisphere 61.2
2861 Female, age 67, both hemispheres 60.7
2436 Male, age 74, both hemispheres 57.0
2620 Female, age 94, left hemisphere 55.9
1867 Male, age 76, both hemispheres 54.3
Parahippocampal cortex
nTPM: 59.3
2245 Female, age 91, both hemispheres 66.4
2532 Female, age 72, left hemisphere 65.5
1850 Male, age 80, both hemispheres 64.2
2622 Female, age 67, right hemisphere 60.1
2693 Female, age 94, both hemispheres 58.6
2250 Female, age 67, right hemisphere 56.4
2018 Male, age 76, both hemispheres 56.3
1990 Female, age 91, right hemisphere 55.4
1933 Female, age 85, both hemispheres 54.9
2692 Male, age 74, both hemispheres 54.8
Perirhinal gyrus
nTPM: 60.2
1794 Male, age 80, right hemisphere 63.7
1841 Female, age 85, right hemisphere 62.2
2848 Male, age 76, right hemisphere 60.1
1847 Female, age 91, left hemisphere 59.0
2521 Female, age 94, right hemisphere 55.7
Subiculum
nTPM: 56.9
2438 Female, age 94, left hemisphere 66.1
2619 Male, age 74, both hemispheres 57.4
1977 Female, age 85, both hemispheres 56.7
2042 Male, age 76, both hemispheres 56.7
1901 Male, age 80, both hemispheres 55.3
2729 Female, age 91, right hemisphere 49.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.9
Samples: 197

Max nTPM: 139.7
Min nTPM: 40.0
Std nTPM: 13.8
Median nTPM: 80.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 139.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 115.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 108.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 108.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 104.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 103.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 103.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 103.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 102.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 102.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 101.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 172.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 172.7
FF:10169-103B7 60 years, female 179.9
FF:10153-102I9 76 years, female 165.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 75.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.4
Samples: 4

Max nTPM: 84.5
Min nTPM: 67.8
Sample A Female 80.7
Sample B Female 67.8
Sample C Male 84.5
Sample D Male 68.7
Entorhinal cortex
nTPM: 73.1
Samples: 4

Max nTPM: 78.2
Min nTPM: 65.5
Sample A Female 77.8
Sample B Female 78.2
Sample C Male 71.0
Sample D Male 65.5
Subiculum
nTPM: 75.2
Samples: 4

Max nTPM: 93.8
Min nTPM: 64.8
Sample A Female 93.8
Sample B Female 71.0
Sample C Male 71.1
Sample D Male 64.8
Ventral hippocampus
nTPM: 73.2
Samples: 4

Max nTPM: 83.7
Min nTPM: 67.1
Sample A Female 68.5
Sample B Female 67.1
Sample C Male 83.7
Sample D Male 73.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.5
Samples: 4

Max nTPM: 113.7
Min nTPM: 91.8
Sample A Male 100.8
Sample B Male 95.5
Sample C Female 91.8
Sample D Female 113.7
Hippocampal formation
nTPM: 96.7
Samples: 4

Max nTPM: 107.3
Min nTPM: 86.7
Sample A Male 93.1
Sample B Male 107.3
Sample C Female 99.5
Sample D Female 86.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.5
68301939 Antisense, RP_041130_02_B02, Mouse strain C57BL/6J (56 days, male) 18.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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