ABOUTMENU
HELP
NEWS
SEC31A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:54.0 nTPM
HPA:54.0 nTPM
GTEx:45.3 nTPM
FANTOM5:93.0 Scaled Tags Per Million
Pig:38.0 nTPM
Mouse:54.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005457
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
1855 Male, age 76, left hemisphere 51.8
2621 Female, age 67, right hemisphere 51.3
2148 Female, age 91, left hemisphere 49.4
1911 Female, age 85, right hemisphere 49.2
1898 Male, age 80, left hemisphere 49.1
2529 Female, age 94, left hemisphere 46.3
Dentate gyrus
nTPM: 49.6
2010 Male, age 76, both hemispheres 55.1
2246 Female, age 85, both hemispheres 51.8
2528 Male, age 74, both hemispheres 49.3
2531 Female, age 67, both hemispheres 48.4
1927 Female, age 91, both hemispheres 48.1
2530 Female, age 94, left hemisphere 44.9
Entorhinal gyrus
nTPM: 51.2
1787 Male, age 76, left hemisphere 54.2
1938 Female, age 85, left hemisphere 51.4
2117 Female, age 91, right hemisphere 51.1
2613 Female, age 94, left hemisphere 51.1
2686 Male, age 75, right hemisphere 50.4
2764 Male, age 80, right hemisphere 49.3
Hippocampus, CA1
nTPM: 51.1
2045 Male, age 76, both hemispheres 53.9
2749 Male, age 80, left hemisphere 53.5
1873 Female, age 85, both hemispheres 51.0
2527 Male, age 74, both hemispheres 50.9
2082 Female, age 91, right hemisphere 46.3
Hippocampus, CA2
nTPM: 49.1
1892 Male, age 76, both hemispheres 55.4
2249 Male, age 74, both hemispheres 50.1
2113 Female, age 91, right hemisphere 48.9
2437 Female, age 94, left hemisphere 47.8
1940 Female, age 85, left hemisphere 46.9
1963 Male, age 80, left hemisphere 45.3
Hippocampus, CA3
nTPM: 51.9
2436 Male, age 74, both hemispheres 66.5
1867 Male, age 76, both hemispheres 51.5
2137 Male, age 80, left hemisphere 51.2
2620 Female, age 94, left hemisphere 48.9
1891 Female, age 85, both hemispheres 48.4
2861 Female, age 67, both hemispheres 45.1
Parahippocampal cortex
nTPM: 52.1
2532 Female, age 72, left hemisphere 55.0
1850 Male, age 80, both hemispheres 54.7
2693 Female, age 94, both hemispheres 54.4
2018 Male, age 76, both hemispheres 52.7
2250 Female, age 67, right hemisphere 51.7
2692 Male, age 74, both hemispheres 51.6
1990 Female, age 91, right hemisphere 51.1
2245 Female, age 91, both hemispheres 51.1
2622 Female, age 67, right hemisphere 50.8
1933 Female, age 85, both hemispheres 48.6
Perirhinal gyrus
nTPM: 54.0
1841 Female, age 85, right hemisphere 55.5
2848 Male, age 76, right hemisphere 55.3
2521 Female, age 94, right hemisphere 54.2
1794 Male, age 80, right hemisphere 53.0
1847 Female, age 91, left hemisphere 52.2
Subiculum
nTPM: 51.3
2042 Male, age 76, both hemispheres 55.0
1977 Female, age 85, both hemispheres 53.5
2619 Male, age 74, both hemispheres 51.8
2438 Female, age 94, left hemisphere 51.0
1901 Male, age 80, both hemispheres 49.1
2729 Female, age 91, right hemisphere 47.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.3
Samples: 197

Max nTPM: 72.8
Min nTPM: 29.5
Std nTPM: 7.3
Median nTPM: 43.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 68.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 68.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 62.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 61.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 60.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 60.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 60.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 59.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 59.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 59.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.0
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 75.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 46.7
Min nTPM: 30.8
Sample A Female 46.7
Sample B Female 37.7
Sample C Male 36.9
Sample D Male 30.8
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 39.8
Min nTPM: 29.7
Sample A Female 39.8
Sample B Female 34.0
Sample C Male 29.7
Sample D Male 29.9
Subiculum
nTPM: 33.0
Samples: 4

Max nTPM: 38.2
Min nTPM: 29.9
Sample A Female 38.2
Sample B Female 29.9
Sample C Male 31.5
Sample D Male 32.5
Ventral hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 40.7
Min nTPM: 27.4
Sample A Female 36.3
Sample B Female 27.4
Sample C Male 40.4
Sample D Male 40.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.8
Samples: 4

Max nTPM: 54.8
Min nTPM: 46.6
Sample A Male 54.8
Sample B Male 53.8
Sample C Female 46.6
Sample D Female 52.1
Hippocampal formation
nTPM: 54.4
Samples: 4

Max nTPM: 59.5
Min nTPM: 43.6
Sample A Male 43.6
Sample B Male 55.4
Sample C Female 59.5
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76003605 Antisense, RP_060608_02_G12, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.