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PPA2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.7 nTPM
HPA:23.7 nTPM
GTEx:10.4 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:60.1 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030888Antibody HPA031671Antibody HPA031672
Glial cells Not detectedLowNot detected
Neuronal cells MediumMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
1911 Female, age 85, right hemisphere 24.0
1898 Male, age 80, left hemisphere 23.9
2529 Female, age 94, left hemisphere 23.9
2148 Female, age 91, left hemisphere 22.4
2621 Female, age 67, right hemisphere 21.9
1855 Male, age 76, left hemisphere 21.1
Dentate gyrus
nTPM: 22.7
1927 Female, age 91, both hemispheres 23.2
2530 Female, age 94, left hemisphere 23.1
2246 Female, age 85, both hemispheres 22.9
2010 Male, age 76, both hemispheres 22.4
2528 Male, age 74, both hemispheres 22.4
2531 Female, age 67, both hemispheres 22.2
Entorhinal gyrus
nTPM: 22.8
1938 Female, age 85, left hemisphere 24.4
2613 Female, age 94, left hemisphere 23.1
2117 Female, age 91, right hemisphere 22.7
1787 Male, age 76, left hemisphere 22.4
2764 Male, age 80, right hemisphere 22.3
2686 Male, age 75, right hemisphere 22.2
Hippocampus, CA1
nTPM: 23.7
2749 Male, age 80, left hemisphere 25.0
2082 Female, age 91, right hemisphere 24.5
1873 Female, age 85, both hemispheres 24.1
2527 Male, age 74, both hemispheres 22.9
2045 Male, age 76, both hemispheres 22.2
Hippocampus, CA2
nTPM: 23.2
2249 Male, age 74, both hemispheres 24.4
2113 Female, age 91, right hemisphere 23.7
2437 Female, age 94, left hemisphere 23.3
1963 Male, age 80, left hemisphere 23.2
1892 Male, age 76, both hemispheres 22.6
1940 Female, age 85, left hemisphere 22.3
Hippocampus, CA3
nTPM: 23.0
2137 Male, age 80, left hemisphere 24.0
2436 Male, age 74, both hemispheres 24.0
1891 Female, age 85, both hemispheres 23.2
1867 Male, age 76, both hemispheres 23.1
2861 Female, age 67, both hemispheres 21.9
2620 Female, age 94, left hemisphere 21.7
Parahippocampal cortex
nTPM: 23.0
2250 Female, age 67, right hemisphere 25.0
1850 Male, age 80, both hemispheres 23.5
1990 Female, age 91, right hemisphere 23.2
1933 Female, age 85, both hemispheres 23.1
2693 Female, age 94, both hemispheres 23.1
2018 Male, age 76, both hemispheres 23.0
2532 Female, age 72, left hemisphere 22.7
2692 Male, age 74, both hemispheres 22.7
2245 Female, age 91, both hemispheres 22.5
2622 Female, age 67, right hemisphere 21.8
Perirhinal gyrus
nTPM: 23.3
1841 Female, age 85, right hemisphere 24.2
1794 Male, age 80, right hemisphere 23.4
2521 Female, age 94, right hemisphere 23.4
1847 Female, age 91, left hemisphere 22.8
2848 Male, age 76, right hemisphere 22.7
Subiculum
nTPM: 22.9
2619 Male, age 74, both hemispheres 24.6
1977 Female, age 85, both hemispheres 24.2
2729 Female, age 91, right hemisphere 23.2
1901 Male, age 80, both hemispheres 22.8
2042 Male, age 76, both hemispheres 22.4
2438 Female, age 94, left hemisphere 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 28.8
Min nTPM: 3.6
Std nTPM: 4.4
Median nTPM: 9.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 23.4
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 22.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 22.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 22.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 20.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 20.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 19.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 18.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.2
FF:10169-103B7 60 years, female 100.4
FF:10153-102I9 76 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 45.3
Min nTPM: 21.6
Sample A Female 45.3
Sample B Female 30.5
Sample C Male 34.6
Sample D Male 21.6
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 50.4
Min nTPM: 25.4
Sample A Female 29.6
Sample B Female 50.4
Sample C Male 33.2
Sample D Male 25.4
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 45.8
Min nTPM: 21.4
Sample A Female 45.8
Sample B Female 27.3
Sample C Male 23.3
Sample D Male 21.4
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.9
Min nTPM: 27.1
Sample A Female 33.9
Sample B Female 28.4
Sample C Male 28.5
Sample D Male 27.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 64.2
Min nTPM: 54.6
Sample A Male 57.8
Sample B Male 63.7
Sample C Female 64.2
Sample D Female 54.6
Hippocampal formation
nTPM: 57.4
Samples: 4

Max nTPM: 70.4
Min nTPM: 48.2
Sample A Male 70.4
Sample B Male 53.4
Sample C Female 48.2
Sample D Female 57.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
69080009 Antisense, RP_050324_01_C09, Mouse strain C57BL/6J (56 days, male) 12.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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