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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:12.4 nTPM
HPA:12.4 nTPM
GTEx:10.5 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:8.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035772
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
1855 Male, age 76, left hemisphere 12.3
1898 Male, age 80, left hemisphere 12.1
2529 Female, age 94, left hemisphere 12.0
2621 Female, age 67, right hemisphere 12.0
1911 Female, age 85, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.3
Dentate gyrus
nTPM: 11.8
2246 Female, age 85, both hemispheres 12.9
1927 Female, age 91, both hemispheres 12.6
2010 Male, age 76, both hemispheres 12.6
2528 Male, age 74, both hemispheres 11.4
2531 Female, age 67, both hemispheres 11.0
2530 Female, age 94, left hemisphere 10.3
Entorhinal gyrus
nTPM: 12.1
2117 Female, age 91, right hemisphere 12.8
1938 Female, age 85, left hemisphere 12.3
2764 Male, age 80, right hemisphere 12.0
1787 Male, age 76, left hemisphere 11.9
2613 Female, age 94, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.9
Hippocampus, CA1
nTPM: 12.1
2045 Male, age 76, both hemispheres 12.8
2527 Male, age 74, both hemispheres 12.5
1873 Female, age 85, both hemispheres 11.7
2082 Female, age 91, right hemisphere 11.7
2749 Male, age 80, left hemisphere 11.6
Hippocampus, CA2
nTPM: 11.8
1892 Male, age 76, both hemispheres 14.3
1940 Female, age 85, left hemisphere 11.7
2249 Male, age 74, both hemispheres 11.4
2437 Female, age 94, left hemisphere 11.3
2113 Female, age 91, right hemisphere 11.2
1963 Male, age 80, left hemisphere 10.9
Hippocampus, CA3
nTPM: 11.6
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 12.1
1867 Male, age 76, both hemispheres 11.9
2620 Female, age 94, left hemisphere 11.8
2137 Male, age 80, left hemisphere 11.2
2861 Female, age 67, both hemispheres 10.5
Parahippocampal cortex
nTPM: 12.4
1933 Female, age 85, both hemispheres 13.0
1850 Male, age 80, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.9
2250 Female, age 67, right hemisphere 12.7
2018 Male, age 76, both hemispheres 12.6
2693 Female, age 94, both hemispheres 12.6
2692 Male, age 74, both hemispheres 12.3
2622 Female, age 67, right hemisphere 12.2
2245 Female, age 91, both hemispheres 11.9
1990 Female, age 91, right hemisphere 11.2
Perirhinal gyrus
nTPM: 12.4
1841 Female, age 85, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.8
2848 Male, age 76, right hemisphere 12.7
1847 Female, age 91, left hemisphere 12.2
1794 Male, age 80, right hemisphere 11.7
Subiculum
nTPM: 12.3
2042 Male, age 76, both hemispheres 13.1
2438 Female, age 94, left hemisphere 13.0
1977 Female, age 85, both hemispheres 12.2
2619 Male, age 74, both hemispheres 12.1
2729 Female, age 91, right hemisphere 12.0
1901 Male, age 80, both hemispheres 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 17.0
Min nTPM: 6.5
Std nTPM: 1.8
Median nTPM: 10.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 16.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 16.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 14.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 14.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 14.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.1
FF:10153-102I9 76 years, female 14.8
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.7
Sample A Female 12.2
Sample B Female 10.7
Sample C Male 12.2
Sample D Male 12.4
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.9
Sample A Female 10.2
Sample B Female 10.8
Sample C Male 9.9
Sample D Male 11.8
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 10.4
Min nTPM: 10.2
Sample A Female 10.4
Sample B Female 10.3
Sample C Male 10.3
Sample D Male 10.2
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.8
Sample A Female 11.9
Sample B Female 10.5
Sample C Male 8.8
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.9
Sample A Male 7.6
Sample B Male 8.1
Sample C Female 6.9
Sample D Female 7.9
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.9
Sample A Male 8.0
Sample B Male 8.1
Sample C Female 8.1
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68924805 Antisense, RP_050309_01_A09, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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