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GABARAPL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:141.9 nTPM
HPA:141.9 nTPM
GTEx:176.4 nTPM
FANTOM5:259.0 Scaled Tags Per Million
Pig:236.6 nTPM
Mouse:704.8 nTPM
Allen mouse:24.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051386
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 141.9
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
1898 Male, age 80, left hemisphere 137.6
2621 Female, age 67, right hemisphere 123.0
1855 Male, age 76, left hemisphere 86.4
1911 Female, age 85, right hemisphere 83.5
2148 Female, age 91, left hemisphere 83.2
2529 Female, age 94, left hemisphere 73.5
Dentate gyrus
nTPM: 105.7
1927 Female, age 91, both hemispheres 162.6
2531 Female, age 67, both hemispheres 113.2
2010 Male, age 76, both hemispheres 102.8
2530 Female, age 94, left hemisphere 97.2
2246 Female, age 85, both hemispheres 89.2
2528 Male, age 74, both hemispheres 69.5
Entorhinal gyrus
nTPM: 122.1
2613 Female, age 94, left hemisphere 159.1
2764 Male, age 80, right hemisphere 149.9
1938 Female, age 85, left hemisphere 140.1
1787 Male, age 76, left hemisphere 114.6
2686 Male, age 75, right hemisphere 92.9
2117 Female, age 91, right hemisphere 76.1
Hippocampus, CA1
nTPM: 117.2
2749 Male, age 80, left hemisphere 168.0
1873 Female, age 85, both hemispheres 123.6
2045 Male, age 76, both hemispheres 106.7
2082 Female, age 91, right hemisphere 98.4
2527 Male, age 74, both hemispheres 89.1
Hippocampus, CA2
nTPM: 98.9
1892 Male, age 76, both hemispheres 138.9
1963 Male, age 80, left hemisphere 108.0
1940 Female, age 85, left hemisphere 95.4
2249 Male, age 74, both hemispheres 91.6
2113 Female, age 91, right hemisphere 83.9
2437 Female, age 94, left hemisphere 75.5
Hippocampus, CA3
nTPM: 122.2
2620 Female, age 94, left hemisphere 181.4
2137 Male, age 80, left hemisphere 131.9
1867 Male, age 76, both hemispheres 127.7
2861 Female, age 67, both hemispheres 99.8
2436 Male, age 74, both hemispheres 99.6
1891 Female, age 85, both hemispheres 93.0
Parahippocampal cortex
nTPM: 113.1
1850 Male, age 80, both hemispheres 144.5
1933 Female, age 85, both hemispheres 140.6
1990 Female, age 91, right hemisphere 140.0
2245 Female, age 91, both hemispheres 135.8
2250 Female, age 67, right hemisphere 109.2
2622 Female, age 67, right hemisphere 101.6
2532 Female, age 72, left hemisphere 96.2
2693 Female, age 94, both hemispheres 92.5
2018 Male, age 76, both hemispheres 89.5
2692 Male, age 74, both hemispheres 80.6
Perirhinal gyrus
nTPM: 141.9
1847 Female, age 91, left hemisphere 217.7
1794 Male, age 80, right hemisphere 145.9
1841 Female, age 85, right hemisphere 136.7
2848 Male, age 76, right hemisphere 111.0
2521 Female, age 94, right hemisphere 98.5
Subiculum
nTPM: 91.9
1901 Male, age 80, both hemispheres 117.8
1977 Female, age 85, both hemispheres 115.8
2619 Male, age 74, both hemispheres 98.5
2042 Male, age 76, both hemispheres 79.2
2729 Female, age 91, right hemisphere 70.6
2438 Female, age 94, left hemisphere 69.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 176.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.4
Samples: 197

Max nTPM: 449.3
Min nTPM: 59.2
Std nTPM: 87.0
Median nTPM: 158.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 449.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 424.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 406.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 400.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 389.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 389.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 375.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 371.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 369.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 358.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 355.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 259.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 259.0
FF:10169-103B7 60 years, female 312.8
FF:10153-102I9 76 years, female 205.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 236.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 236.6
Samples: 4

Max nTPM: 339.2
Min nTPM: 173.1
Sample A Female 339.2
Sample B Female 220.5
Sample C Male 213.6
Sample D Male 173.1
Entorhinal cortex
nTPM: 184.2
Samples: 4

Max nTPM: 212.4
Min nTPM: 153.9
Sample A Female 212.4
Sample B Female 210.2
Sample C Male 153.9
Sample D Male 160.3
Subiculum
nTPM: 175.5
Samples: 4

Max nTPM: 255.6
Min nTPM: 133.7
Sample A Female 255.6
Sample B Female 157.8
Sample C Male 154.7
Sample D Male 133.7
Ventral hippocampus
nTPM: 195.4
Samples: 4

Max nTPM: 232.0
Min nTPM: 125.2
Sample A Female 216.9
Sample B Female 125.2
Sample C Male 232.0
Sample D Male 207.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 704.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 704.8
Samples: 4

Max nTPM: 745.7
Min nTPM: 659.7
Sample A Male 659.7
Sample B Male 707.6
Sample C Female 706.3
Sample D Female 745.7
Hippocampal formation
nTPM: 687.0
Samples: 4

Max nTPM: 784.4
Min nTPM: 622.2
Sample A Male 784.4
Sample B Male 646.3
Sample C Female 695.0
Sample D Female 622.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.8
71608204 Antisense, RP_050927_01_A12, Mouse strain C57BL/6J (56 days, male) 28.5
654925 Antisense, RP_040922_01_A11, Mouse strain C57BL/6J (56 days, male) 21.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.