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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:17.5 nTPM
HPA:17.5 nTPM
GTEx:16.1 nTPM
FANTOM5:20.4 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:22.0 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039094Antibody HPA039095
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
2148 Female, age 91, left hemisphere 19.7
1898 Male, age 80, left hemisphere 18.1
2621 Female, age 67, right hemisphere 17.1
1855 Male, age 76, left hemisphere 14.8
2529 Female, age 94, left hemisphere 14.2
1911 Female, age 85, right hemisphere 13.8
Dentate gyrus
nTPM: 17.2
2530 Female, age 94, left hemisphere 18.9
1927 Female, age 91, both hemispheres 18.4
2531 Female, age 67, both hemispheres 18.0
2528 Male, age 74, both hemispheres 16.1
2010 Male, age 76, both hemispheres 15.8
2246 Female, age 85, both hemispheres 15.7
Entorhinal gyrus
nTPM: 16.0
2613 Female, age 94, left hemisphere 18.7
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 15.8
1938 Female, age 85, left hemisphere 15.5
2686 Male, age 75, right hemisphere 15.2
2117 Female, age 91, right hemisphere 13.1
Hippocampus, CA1
nTPM: 17.0
2749 Male, age 80, left hemisphere 22.1
2527 Male, age 74, both hemispheres 16.9
1873 Female, age 85, both hemispheres 15.6
2045 Male, age 76, both hemispheres 15.2
2082 Female, age 91, right hemisphere 15.1
Hippocampus, CA2
nTPM: 16.2
1963 Male, age 80, left hemisphere 18.7
1892 Male, age 76, both hemispheres 17.8
2437 Female, age 94, left hemisphere 16.6
2249 Male, age 74, both hemispheres 14.8
1940 Female, age 85, left hemisphere 14.7
2113 Female, age 91, right hemisphere 14.6
Hippocampus, CA3
nTPM: 17.5
2861 Female, age 67, both hemispheres 22.1
2620 Female, age 94, left hemisphere 19.3
2137 Male, age 80, left hemisphere 19.0
1867 Male, age 76, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.8
1891 Female, age 85, both hemispheres 14.7
Parahippocampal cortex
nTPM: 15.9
2245 Female, age 91, both hemispheres 17.6
1850 Male, age 80, both hemispheres 17.1
2622 Female, age 67, right hemisphere 16.7
2693 Female, age 94, both hemispheres 16.5
2692 Male, age 74, both hemispheres 15.7
2532 Female, age 72, left hemisphere 15.5
1933 Female, age 85, both hemispheres 15.4
1990 Female, age 91, right hemisphere 15.4
2250 Female, age 67, right hemisphere 15.0
2018 Male, age 76, both hemispheres 14.2
Perirhinal gyrus
nTPM: 17.4
1847 Female, age 91, left hemisphere 20.2
1794 Male, age 80, right hemisphere 18.8
2521 Female, age 94, right hemisphere 17.0
1841 Female, age 85, right hemisphere 16.2
2848 Male, age 76, right hemisphere 14.7
Subiculum
nTPM: 14.2
2619 Male, age 74, both hemispheres 16.2
1977 Female, age 85, both hemispheres 15.8
1901 Male, age 80, both hemispheres 15.0
2729 Female, age 91, right hemisphere 13.7
2438 Female, age 94, left hemisphere 13.6
2042 Male, age 76, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.1
Samples: 197

Max nTPM: 34.2
Min nTPM: 5.8
Std nTPM: 5.8
Median nTPM: 15.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 32.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 30.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 29.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 27.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 25.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 25.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 25.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.4
FF:10153-102I9 76 years, female 24.1
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.1
Sample A Female 16.9
Sample B Female 15.6
Sample C Male 13.5
Sample D Male 13.1
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.9
Sample A Female 15.0
Sample B Female 12.9
Sample C Male 14.7
Sample D Male 13.1
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.6
Sample A Female 16.1
Sample B Female 12.6
Sample C Male 14.9
Sample D Male 13.3
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 18.8
Min nTPM: 11.2
Sample A Female 14.9
Sample B Female 11.2
Sample C Male 18.8
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 23.7
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 22.9
Sample C Female 23.7
Sample D Female 21.8
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.2
Sample A Male 19.3
Sample B Male 17.6
Sample C Female 16.2
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68445694 Antisense, RP_050113_01_B04, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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