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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:49.6 nTPM
HPA:49.6 nTPM
GTEx:36.6 nTPM
FANTOM5:64.1 Scaled Tags Per Million
Pig:94.9 nTPM
Mouse:91.8 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021213Antibody CAB004321
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.6
Sample id Sample description nTPM
Hippocampus
nTPM: 44.9
2529 Female, age 94, left hemisphere 52.5
2621 Female, age 67, right hemisphere 52.3
2148 Female, age 91, left hemisphere 43.6
1898 Male, age 80, left hemisphere 41.7
1855 Male, age 76, left hemisphere 40.8
1911 Female, age 85, right hemisphere 38.8
Dentate gyrus
nTPM: 41.8
2531 Female, age 67, both hemispheres 49.1
2530 Female, age 94, left hemisphere 49.0
2246 Female, age 85, both hemispheres 40.9
1927 Female, age 91, both hemispheres 39.7
2010 Male, age 76, both hemispheres 37.6
2528 Male, age 74, both hemispheres 34.4
Entorhinal gyrus
nTPM: 47.8
2686 Male, age 75, right hemisphere 53.1
2613 Female, age 94, left hemisphere 50.8
2764 Male, age 80, right hemisphere 48.0
1787 Male, age 76, left hemisphere 47.2
1938 Female, age 85, left hemisphere 46.4
2117 Female, age 91, right hemisphere 41.2
Hippocampus, CA1
nTPM: 40.2
2045 Male, age 76, both hemispheres 42.7
2527 Male, age 74, both hemispheres 41.2
1873 Female, age 85, both hemispheres 39.7
2749 Male, age 80, left hemisphere 39.2
2082 Female, age 91, right hemisphere 38.3
Hippocampus, CA2
nTPM: 41.1
1963 Male, age 80, left hemisphere 44.6
2437 Female, age 94, left hemisphere 44.1
1892 Male, age 76, both hemispheres 43.8
1940 Female, age 85, left hemisphere 41.0
2113 Female, age 91, right hemisphere 40.3
2249 Male, age 74, both hemispheres 33.0
Hippocampus, CA3
nTPM: 42.0
2620 Female, age 94, left hemisphere 51.0
2861 Female, age 67, both hemispheres 50.7
2137 Male, age 80, left hemisphere 41.6
1891 Female, age 85, both hemispheres 40.5
1867 Male, age 76, both hemispheres 40.2
2436 Male, age 74, both hemispheres 27.8
Parahippocampal cortex
nTPM: 46.2
2622 Female, age 67, right hemisphere 53.8
2245 Female, age 91, both hemispheres 52.7
1850 Male, age 80, both hemispheres 50.4
2532 Female, age 72, left hemisphere 48.7
2692 Male, age 74, both hemispheres 45.3
1990 Female, age 91, right hemisphere 43.2
2018 Male, age 76, both hemispheres 42.9
1933 Female, age 85, both hemispheres 42.0
2693 Female, age 94, both hemispheres 41.9
2250 Female, age 67, right hemisphere 41.1
Perirhinal gyrus
nTPM: 49.6
1794 Male, age 80, right hemisphere 55.3
2848 Male, age 76, right hemisphere 53.0
1841 Female, age 85, right hemisphere 50.3
1847 Female, age 91, left hemisphere 47.4
2521 Female, age 94, right hemisphere 42.1
Subiculum
nTPM: 40.8
2619 Male, age 74, both hemispheres 46.0
2438 Female, age 94, left hemisphere 43.3
1977 Female, age 85, both hemispheres 41.8
2729 Female, age 91, right hemisphere 39.8
1901 Male, age 80, both hemispheres 38.2
2042 Male, age 76, both hemispheres 36.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.6
Samples: 197

Max nTPM: 71.3
Min nTPM: 11.8
Std nTPM: 9.4
Median nTPM: 36.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 71.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 61.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 60.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 57.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 57.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 57.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 56.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 54.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 54.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.1
FF:10153-102I9 76 years, female 82.2
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 82.9
Samples: 4

Max nTPM: 92.5
Min nTPM: 64.4
Sample A Female 92.5
Sample B Female 82.8
Sample C Male 91.9
Sample D Male 64.4
Entorhinal cortex
nTPM: 94.9
Samples: 4

Max nTPM: 101.1
Min nTPM: 84.4
Sample A Female 96.5
Sample B Female 97.5
Sample C Male 101.1
Sample D Male 84.4
Subiculum
nTPM: 90.3
Samples: 4

Max nTPM: 121.1
Min nTPM: 70.3
Sample A Female 121.1
Sample B Female 85.9
Sample C Male 83.7
Sample D Male 70.3
Ventral hippocampus
nTPM: 84.0
Samples: 4

Max nTPM: 106.2
Min nTPM: 70.1
Sample A Female 72.2
Sample B Female 70.1
Sample C Male 106.2
Sample D Male 87.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.8
Samples: 4

Max nTPM: 94.4
Min nTPM: 89.2
Sample A Male 93.0
Sample B Male 94.4
Sample C Female 90.5
Sample D Female 89.2
Hippocampal formation
nTPM: 84.9
Samples: 4

Max nTPM: 90.8
Min nTPM: 81.4
Sample A Male 81.4
Sample B Male 90.8
Sample C Female 83.4
Sample D Female 83.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69444723 Antisense, RP_050414_04_D12, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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