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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:23.0 nTPM
FANTOM5:40.2 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:30.8 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026589
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
1898 Male, age 80, left hemisphere 28.9
1855 Male, age 76, left hemisphere 28.4
2148 Female, age 91, left hemisphere 28.0
1911 Female, age 85, right hemisphere 27.6
2529 Female, age 94, left hemisphere 26.4
2621 Female, age 67, right hemisphere 25.8
Dentate gyrus
nTPM: 27.3
1927 Female, age 91, both hemispheres 28.1
2246 Female, age 85, both hemispheres 27.7
2528 Male, age 74, both hemispheres 27.4
2010 Male, age 76, both hemispheres 27.3
2530 Female, age 94, left hemisphere 26.8
2531 Female, age 67, both hemispheres 26.6
Entorhinal gyrus
nTPM: 26.6
2613 Female, age 94, left hemisphere 27.6
1787 Male, age 76, left hemisphere 27.1
2686 Male, age 75, right hemisphere 26.4
2764 Male, age 80, right hemisphere 26.3
2117 Female, age 91, right hemisphere 26.1
1938 Female, age 85, left hemisphere 25.9
Hippocampus, CA1
nTPM: 27.7
2045 Male, age 76, both hemispheres 29.1
2749 Male, age 80, left hemisphere 28.1
1873 Female, age 85, both hemispheres 27.3
2082 Female, age 91, right hemisphere 27.3
2527 Male, age 74, both hemispheres 26.4
Hippocampus, CA2
nTPM: 26.9
1892 Male, age 76, both hemispheres 28.2
1963 Male, age 80, left hemisphere 28.2
2113 Female, age 91, right hemisphere 26.9
2249 Male, age 74, both hemispheres 26.5
2437 Female, age 94, left hemisphere 26.3
1940 Female, age 85, left hemisphere 25.6
Hippocampus, CA3
nTPM: 27.5
1867 Male, age 76, both hemispheres 28.2
1891 Female, age 85, both hemispheres 28.0
2620 Female, age 94, left hemisphere 27.8
2137 Male, age 80, left hemisphere 27.4
2861 Female, age 67, both hemispheres 26.9
2436 Male, age 74, both hemispheres 26.7
Parahippocampal cortex
nTPM: 27.1
2018 Male, age 76, both hemispheres 28.2
2693 Female, age 94, both hemispheres 28.2
1933 Female, age 85, both hemispheres 27.7
2692 Male, age 74, both hemispheres 27.4
1990 Female, age 91, right hemisphere 26.8
2532 Female, age 72, left hemisphere 26.8
2245 Female, age 91, both hemispheres 26.7
2250 Female, age 67, right hemisphere 26.6
1850 Male, age 80, both hemispheres 26.2
2622 Female, age 67, right hemisphere 26.2
Perirhinal gyrus
nTPM: 26.7
2521 Female, age 94, right hemisphere 28.2
1841 Female, age 85, right hemisphere 26.7
1847 Female, age 91, left hemisphere 26.7
2848 Male, age 76, right hemisphere 26.4
1794 Male, age 80, right hemisphere 25.5
Subiculum
nTPM: 26.7
2042 Male, age 76, both hemispheres 27.7
1901 Male, age 80, both hemispheres 27.5
2619 Male, age 74, both hemispheres 26.8
2729 Female, age 91, right hemisphere 26.6
1977 Female, age 85, both hemispheres 26.4
2438 Female, age 94, left hemisphere 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 66.2
Min nTPM: 5.4
Std nTPM: 10.0
Median nTPM: 21.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 66.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 57.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 53.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 51.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 50.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 49.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 46.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 44.9
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 43.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 43.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.2
FF:10169-103B7 60 years, female 49.1
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 15.8
Min nTPM: 14.3
Sample A Female 14.3
Sample B Female 15.8
Sample C Male 15.1
Sample D Male 14.4
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 15.8
Min nTPM: 14.4
Sample A Female 15.2
Sample B Female 15.8
Sample C Male 14.4
Sample D Male 14.6
Subiculum
nTPM: 14.6
Samples: 4

Max nTPM: 15.3
Min nTPM: 14.2
Sample A Female 14.2
Sample B Female 15.3
Sample C Male 14.6
Sample D Male 14.3
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.0
Sample A Female 14.9
Sample B Female 14.0
Sample C Male 16.3
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.8
Samples: 4

Max nTPM: 31.6
Min nTPM: 29.5
Sample A Male 29.5
Sample B Male 31.3
Sample C Female 31.6
Sample D Female 30.8
Hippocampal formation
nTPM: 27.9
Samples: 4

Max nTPM: 30.3
Min nTPM: 25.7
Sample A Male 27.1
Sample B Male 25.7
Sample C Female 28.3
Sample D Female 30.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
75990553 Antisense, RP_060608_01_D05, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

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