ABOUTMENU
HELP
NEWS
NCOA2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:6.6 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:25.8 nTPM
Mouse:26.0 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.0
1855 Male, age 76, left hemisphere 10.9
2621 Female, age 67, right hemisphere 10.0
2148 Female, age 91, left hemisphere 9.1
1911 Female, age 85, right hemisphere 8.1
1898 Male, age 80, left hemisphere 7.9
2529 Female, age 94, left hemisphere 7.9
Dentate gyrus
nTPM: 8.7
2010 Male, age 76, both hemispheres 11.0
1927 Female, age 91, both hemispheres 10.8
2246 Female, age 85, both hemispheres 9.0
2531 Female, age 67, both hemispheres 8.1
2528 Male, age 74, both hemispheres 7.0
2530 Female, age 94, left hemisphere 6.5
Entorhinal gyrus
nTPM: 7.4
2117 Female, age 91, right hemisphere 8.6
1787 Male, age 76, left hemisphere 8.2
1938 Female, age 85, left hemisphere 7.8
2764 Male, age 80, right hemisphere 7.8
2686 Male, age 75, right hemisphere 6.7
2613 Female, age 94, left hemisphere 5.5
Hippocampus, CA1
nTPM: 13.6
2749 Male, age 80, left hemisphere 26.8
2045 Male, age 76, both hemispheres 14.4
2527 Male, age 74, both hemispheres 10.0
1873 Female, age 85, both hemispheres 9.7
2082 Female, age 91, right hemisphere 7.4
Hippocampus, CA2
nTPM: 7.4
1892 Male, age 76, both hemispheres 10.8
1963 Male, age 80, left hemisphere 8.8
2437 Female, age 94, left hemisphere 8.6
2249 Male, age 74, both hemispheres 6.7
2113 Female, age 91, right hemisphere 5.9
1940 Female, age 85, left hemisphere 3.7
Hippocampus, CA3
nTPM: 13.1
2137 Male, age 80, left hemisphere 24.3
2620 Female, age 94, left hemisphere 15.0
1867 Male, age 76, both hemispheres 12.8
2861 Female, age 67, both hemispheres 11.7
2436 Male, age 74, both hemispheres 7.4
1891 Female, age 85, both hemispheres 7.3
Parahippocampal cortex
nTPM: 6.7
2245 Female, age 91, both hemispheres 8.5
2532 Female, age 72, left hemisphere 8.4
2250 Female, age 67, right hemisphere 7.8
2693 Female, age 94, both hemispheres 7.1
2622 Female, age 67, right hemisphere 6.9
1990 Female, age 91, right hemisphere 6.4
1850 Male, age 80, both hemispheres 6.2
2692 Male, age 74, both hemispheres 5.5
1933 Female, age 85, both hemispheres 5.2
2018 Male, age 76, both hemispheres 4.6
Perirhinal gyrus
nTPM: 8.3
2848 Male, age 76, right hemisphere 9.6
1847 Female, age 91, left hemisphere 9.4
1794 Male, age 80, right hemisphere 8.0
2521 Female, age 94, right hemisphere 7.7
1841 Female, age 85, right hemisphere 6.5
Subiculum
nTPM: 8.6
1901 Male, age 80, both hemispheres 11.8
2042 Male, age 76, both hemispheres 10.2
1977 Female, age 85, both hemispheres 9.7
2729 Female, age 91, right hemisphere 7.5
2619 Male, age 74, both hemispheres 7.3
2438 Female, age 94, left hemisphere 5.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.6
Samples: 197

Max nTPM: 10.6
Min nTPM: 3.9
Std nTPM: 1.3
Median nTPM: 6.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 10.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 9.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 9.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 9.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 9.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 9.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 9.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 9.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 8.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 23.8
Sample A Female 23.8
Sample B Female 24.9
Sample C Male 25.5
Sample D Male 24.8
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 25.9
Min nTPM: 21.4
Sample A Female 25.9
Sample B Female 21.4
Sample C Male 23.4
Sample D Male 23.2
Subiculum
nTPM: 25.4
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.3
Sample A Female 28.1
Sample B Female 23.8
Sample C Male 27.2
Sample D Male 22.3
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 30.2
Min nTPM: 23.7
Sample A Female 24.6
Sample B Female 23.7
Sample C Male 30.2
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 22.7
Sample A Male 24.6
Sample B Male 24.6
Sample C Female 22.7
Sample D Female 32.0
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.7
Sample A Male 19.7
Sample B Male 22.8
Sample C Female 24.5
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
68668090 Antisense, RP_050203_01_D07, Mouse strain C57BL/6J (56 days, male) 5.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.