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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:83.0 nTPM
HPA:83.0 nTPM
GTEx:76.0 nTPM
FANTOM5:144.9 Scaled Tags Per Million
Pig:45.5 nTPM
Mouse:37.2 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021641Antibody HPA024553
Glial cells LowLow
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.0
Sample id Sample description nTPM
Hippocampus
nTPM: 82.7
2148 Female, age 91, left hemisphere 93.2
2621 Female, age 67, right hemisphere 84.8
2529 Female, age 94, left hemisphere 82.2
1855 Male, age 76, left hemisphere 82.0
1898 Male, age 80, left hemisphere 77.3
1911 Female, age 85, right hemisphere 76.8
Dentate gyrus
nTPM: 79.5
2531 Female, age 67, both hemispheres 92.2
1927 Female, age 91, both hemispheres 88.1
2528 Male, age 74, both hemispheres 75.2
2010 Male, age 76, both hemispheres 74.4
2246 Female, age 85, both hemispheres 74.2
2530 Female, age 94, left hemisphere 73.0
Entorhinal gyrus
nTPM: 83.0
2613 Female, age 94, left hemisphere 90.8
2686 Male, age 75, right hemisphere 89.4
1938 Female, age 85, left hemisphere 84.1
2764 Male, age 80, right hemisphere 83.1
1787 Male, age 76, left hemisphere 77.9
2117 Female, age 91, right hemisphere 72.8
Hippocampus, CA1
nTPM: 80.9
2045 Male, age 76, both hemispheres 83.1
2749 Male, age 80, left hemisphere 81.8
2082 Female, age 91, right hemisphere 81.0
2527 Male, age 74, both hemispheres 79.9
1873 Female, age 85, both hemispheres 78.9
Hippocampus, CA2
nTPM: 78.4
1963 Male, age 80, left hemisphere 100.2
2113 Female, age 91, right hemisphere 80.9
2437 Female, age 94, left hemisphere 76.5
1892 Male, age 76, both hemispheres 73.3
1940 Female, age 85, left hemisphere 72.5
2249 Male, age 74, both hemispheres 66.8
Hippocampus, CA3
nTPM: 80.4
2861 Female, age 67, both hemispheres 98.7
2620 Female, age 94, left hemisphere 87.1
2137 Male, age 80, left hemisphere 81.1
1867 Male, age 76, both hemispheres 74.3
1891 Female, age 85, both hemispheres 72.6
2436 Male, age 74, both hemispheres 68.3
Parahippocampal cortex
nTPM: 79.9
2245 Female, age 91, both hemispheres 88.4
2622 Female, age 67, right hemisphere 86.0
1933 Female, age 85, both hemispheres 82.4
2250 Female, age 67, right hemisphere 79.0
1850 Male, age 80, both hemispheres 78.9
2532 Female, age 72, left hemisphere 78.8
2693 Female, age 94, both hemispheres 78.8
2018 Male, age 76, both hemispheres 77.5
1990 Female, age 91, right hemisphere 76.8
2692 Male, age 74, both hemispheres 72.4
Perirhinal gyrus
nTPM: 82.8
1847 Female, age 91, left hemisphere 89.8
1794 Male, age 80, right hemisphere 82.7
2521 Female, age 94, right hemisphere 81.6
2848 Male, age 76, right hemisphere 80.2
1841 Female, age 85, right hemisphere 79.8
Subiculum
nTPM: 71.9
2729 Female, age 91, right hemisphere 79.6
1977 Female, age 85, both hemispheres 76.4
2619 Male, age 74, both hemispheres 72.9
2042 Male, age 76, both hemispheres 67.8
2438 Female, age 94, left hemisphere 67.5
1901 Male, age 80, both hemispheres 67.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.0
Samples: 197

Max nTPM: 205.9
Min nTPM: 13.9
Std nTPM: 33.9
Median nTPM: 73.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 205.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 200.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 186.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 168.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 158.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 151.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 150.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 146.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 134.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 133.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 132.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.9
FF:10153-102I9 76 years, female 165.3
FF:10169-103B7 60 years, female 124.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 56.1
Min nTPM: 27.3
Sample A Female 51.3
Sample B Female 56.1
Sample C Male 27.3
Sample D Male 47.4
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 46.1
Min nTPM: 32.9
Sample A Female 44.3
Sample B Female 37.1
Sample C Male 46.1
Sample D Male 32.9
Subiculum
nTPM: 39.9
Samples: 4

Max nTPM: 54.5
Min nTPM: 32.7
Sample A Female 54.5
Sample B Female 37.0
Sample C Male 35.5
Sample D Male 32.7
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 53.8
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 34.8
Sample C Male 41.9
Sample D Male 53.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 40.5
Min nTPM: 33.0
Sample A Male 40.5
Sample B Male 37.0
Sample C Female 38.3
Sample D Female 33.0
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 39.9
Min nTPM: 33.5
Sample A Male 39.9
Sample B Male 37.0
Sample C Female 33.5
Sample D Female 36.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
69873355 Antisense, RP_050512_01_A12, Mouse strain C57BL/6J (56 days, male) 7.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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