ABOUTMENU
HELP
NEWS
SS18
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.8 nTPM
HPA:21.8 nTPM
GTEx:22.2 nTPM
FANTOM5:102.5 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:23.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055741Antibody HPA059539
Glial cells Not detectedMedium
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1911 Female, age 85, right hemisphere 23.4
1855 Male, age 76, left hemisphere 23.0
2148 Female, age 91, left hemisphere 21.8
2529 Female, age 94, left hemisphere 20.5
1898 Male, age 80, left hemisphere 19.4
2621 Female, age 67, right hemisphere 18.7
Dentate gyrus
nTPM: 20.4
2528 Male, age 74, both hemispheres 22.5
2530 Female, age 94, left hemisphere 22.4
2010 Male, age 76, both hemispheres 21.8
2246 Female, age 85, both hemispheres 20.2
1927 Female, age 91, both hemispheres 18.5
2531 Female, age 67, both hemispheres 17.1
Entorhinal gyrus
nTPM: 18.3
2117 Female, age 91, right hemisphere 21.8
2686 Male, age 75, right hemisphere 18.2
1938 Female, age 85, left hemisphere 18.0
1787 Male, age 76, left hemisphere 17.9
2764 Male, age 80, right hemisphere 17.9
2613 Female, age 94, left hemisphere 15.9
Hippocampus, CA1
nTPM: 21.2
1873 Female, age 85, both hemispheres 23.1
2749 Male, age 80, left hemisphere 23.0
2527 Male, age 74, both hemispheres 20.7
2082 Female, age 91, right hemisphere 20.5
2045 Male, age 76, both hemispheres 18.6
Hippocampus, CA2
nTPM: 21.2
2249 Male, age 74, both hemispheres 24.5
2113 Female, age 91, right hemisphere 21.8
1963 Male, age 80, left hemisphere 21.1
1940 Female, age 85, left hemisphere 20.5
1892 Male, age 76, both hemispheres 19.9
2437 Female, age 94, left hemisphere 19.4
Hippocampus, CA3
nTPM: 20.4
2436 Male, age 74, both hemispheres 21.4
1891 Female, age 85, both hemispheres 21.2
2620 Female, age 94, left hemisphere 21.0
2137 Male, age 80, left hemisphere 20.8
1867 Male, age 76, both hemispheres 19.2
2861 Female, age 67, both hemispheres 18.6
Parahippocampal cortex
nTPM: 19.2
2245 Female, age 91, both hemispheres 21.6
2532 Female, age 72, left hemisphere 20.9
2692 Male, age 74, both hemispheres 20.6
1990 Female, age 91, right hemisphere 20.2
2018 Male, age 76, both hemispheres 19.0
2250 Female, age 67, right hemisphere 18.9
1933 Female, age 85, both hemispheres 18.5
1850 Male, age 80, both hemispheres 17.9
2693 Female, age 94, both hemispheres 17.5
2622 Female, age 67, right hemisphere 17.4
Perirhinal gyrus
nTPM: 17.8
1847 Female, age 91, left hemisphere 18.1
1841 Female, age 85, right hemisphere 17.9
1794 Male, age 80, right hemisphere 17.7
2521 Female, age 94, right hemisphere 17.6
2848 Male, age 76, right hemisphere 17.6
Subiculum
nTPM: 21.8
2729 Female, age 91, right hemisphere 24.0
2042 Male, age 76, both hemispheres 23.8
1901 Male, age 80, both hemispheres 22.9
1977 Female, age 85, both hemispheres 20.8
2619 Male, age 74, both hemispheres 20.8
2438 Female, age 94, left hemisphere 18.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 37.1
Min nTPM: 12.2
Std nTPM: 5.4
Median nTPM: 21.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 37.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 36.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 34.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 34.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 33.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 33.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 32.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.5
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 96.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 16.9
Sample A Female 27.5
Sample B Female 17.7
Sample C Male 26.2
Sample D Male 16.9
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.9
Sample A Female 18.2
Sample B Female 18.1
Sample C Male 19.0
Sample D Male 16.9
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 15.9
Sample A Female 19.1
Sample B Female 16.0
Sample C Male 15.9
Sample D Male 18.8
Ventral hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.9
Sample A Female 21.8
Sample B Female 16.9
Sample C Male 16.9
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.3
Sample A Male 16.9
Sample B Male 14.8
Sample C Female 18.8
Sample D Female 12.3
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 26.4
Min nTPM: 20.1
Sample A Male 20.1
Sample B Male 23.0
Sample C Female 26.4
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69885762 Antisense, RP_050512_03_D06, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.