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RAB40B
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.1 nTPM
HPA:52.1 nTPM
GTEx:72.9 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:31.5 nTPM
Mouse:41.7 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.1
Sample id Sample description nTPM
Hippocampus
nTPM: 47.8
2148 Female, age 91, left hemisphere 50.9
1898 Male, age 80, left hemisphere 49.6
1855 Male, age 76, left hemisphere 48.9
1911 Female, age 85, right hemisphere 47.3
2529 Female, age 94, left hemisphere 46.8
2621 Female, age 67, right hemisphere 43.5
Dentate gyrus
nTPM: 50.9
2531 Female, age 67, both hemispheres 55.1
2010 Male, age 76, both hemispheres 53.8
1927 Female, age 91, both hemispheres 52.5
2530 Female, age 94, left hemisphere 49.6
2246 Female, age 85, both hemispheres 48.5
2528 Male, age 74, both hemispheres 45.8
Entorhinal gyrus
nTPM: 46.7
2764 Male, age 80, right hemisphere 49.8
2117 Female, age 91, right hemisphere 49.3
1938 Female, age 85, left hemisphere 47.0
2613 Female, age 94, left hemisphere 46.4
1787 Male, age 76, left hemisphere 46.3
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 52.1
2045 Male, age 76, both hemispheres 64.8
2749 Male, age 80, left hemisphere 56.5
1873 Female, age 85, both hemispheres 53.5
2082 Female, age 91, right hemisphere 44.7
2527 Male, age 74, both hemispheres 40.8
Hippocampus, CA2
nTPM: 47.8
1963 Male, age 80, left hemisphere 59.8
1892 Male, age 76, both hemispheres 47.7
1940 Female, age 85, left hemisphere 47.1
2437 Female, age 94, left hemisphere 45.2
2249 Male, age 74, both hemispheres 43.6
2113 Female, age 91, right hemisphere 43.5
Hippocampus, CA3
nTPM: 50.4
1867 Male, age 76, both hemispheres 57.7
2620 Female, age 94, left hemisphere 56.2
2137 Male, age 80, left hemisphere 54.6
1891 Female, age 85, both hemispheres 50.3
2861 Female, age 67, both hemispheres 46.9
2436 Male, age 74, both hemispheres 36.9
Parahippocampal cortex
nTPM: 42.8
2532 Female, age 72, left hemisphere 49.8
2018 Male, age 76, both hemispheres 48.1
1933 Female, age 85, both hemispheres 44.4
2245 Female, age 91, both hemispheres 43.4
1850 Male, age 80, both hemispheres 43.3
1990 Female, age 91, right hemisphere 42.7
2692 Male, age 74, both hemispheres 42.6
2250 Female, age 67, right hemisphere 39.2
2693 Female, age 94, both hemispheres 37.4
2622 Female, age 67, right hemisphere 36.8
Perirhinal gyrus
nTPM: 43.9
2521 Female, age 94, right hemisphere 47.2
1794 Male, age 80, right hemisphere 46.6
1841 Female, age 85, right hemisphere 44.4
1847 Female, age 91, left hemisphere 43.9
2848 Male, age 76, right hemisphere 37.5
Subiculum
nTPM: 45.2
1901 Male, age 80, both hemispheres 50.2
1977 Female, age 85, both hemispheres 48.5
2042 Male, age 76, both hemispheres 48.2
2729 Female, age 91, right hemisphere 43.6
2619 Male, age 74, both hemispheres 41.2
2438 Female, age 94, left hemisphere 39.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.9
Samples: 197

Max nTPM: 165.6
Min nTPM: 18.5
Std nTPM: 22.1
Median nTPM: 69.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 165.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 146.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 141.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 138.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 135.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 133.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 127.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 126.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 120.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 116.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 115.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.2
FF:10153-102I9 76 years, female 62.9
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 31.7
Min nTPM: 25.4
Sample A Female 31.7
Sample B Female 31.0
Sample C Male 25.4
Sample D Male 27.3
Entorhinal cortex
nTPM: 31.5
Samples: 4

Max nTPM: 32.6
Min nTPM: 30.3
Sample A Female 31.6
Sample B Female 32.6
Sample C Male 31.4
Sample D Male 30.3
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 34.1
Min nTPM: 27.7
Sample A Female 34.1
Sample B Female 27.7
Sample C Male 28.8
Sample D Male 28.1
Ventral hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 26.0
Sample A Female 30.3
Sample B Female 26.0
Sample C Male 36.9
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 28.8
Min nTPM: 26.2
Sample A Male 27.0
Sample B Male 26.2
Sample C Female 28.2
Sample D Female 28.8
Hippocampal formation
nTPM: 41.7
Samples: 4

Max nTPM: 46.0
Min nTPM: 36.0
Sample A Male 40.6
Sample B Male 46.0
Sample C Female 44.0
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69817874 Antisense, RP_050510_03_H06, Mouse strain C57BL/6J (56 days, male) 3.5

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The Human Protein Atlas

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