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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:39.0 nTPM
HPA:39.0 nTPM
GTEx:38.5 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:44.4 nTPM
Mouse:79.1 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB015410
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.0
Sample id Sample description nTPM
Hippocampus
nTPM: 37.3
1898 Male, age 80, left hemisphere 44.7
1855 Male, age 76, left hemisphere 40.3
2621 Female, age 67, right hemisphere 36.4
2148 Female, age 91, left hemisphere 35.7
2529 Female, age 94, left hemisphere 35.2
1911 Female, age 85, right hemisphere 31.7
Dentate gyrus
nTPM: 35.6
2010 Male, age 76, both hemispheres 38.8
1927 Female, age 91, both hemispheres 37.6
2530 Female, age 94, left hemisphere 36.0
2246 Female, age 85, both hemispheres 34.6
2528 Male, age 74, both hemispheres 33.5
2531 Female, age 67, both hemispheres 33.1
Entorhinal gyrus
nTPM: 36.0
2686 Male, age 75, right hemisphere 38.2
2764 Male, age 80, right hemisphere 38.0
1938 Female, age 85, left hemisphere 36.2
2613 Female, age 94, left hemisphere 35.3
2117 Female, age 91, right hemisphere 34.4
1787 Male, age 76, left hemisphere 34.2
Hippocampus, CA1
nTPM: 39.0
2749 Male, age 80, left hemisphere 54.7
1873 Female, age 85, both hemispheres 39.7
2045 Male, age 76, both hemispheres 34.3
2527 Male, age 74, both hemispheres 33.7
2082 Female, age 91, right hemisphere 32.8
Hippocampus, CA2
nTPM: 36.2
1892 Male, age 76, both hemispheres 43.2
1963 Male, age 80, left hemisphere 43.2
1940 Female, age 85, left hemisphere 33.5
2437 Female, age 94, left hemisphere 32.8
2113 Female, age 91, right hemisphere 32.3
2249 Male, age 74, both hemispheres 32.2
Hippocampus, CA3
nTPM: 35.7
2137 Male, age 80, left hemisphere 40.7
2861 Female, age 67, both hemispheres 40.0
1867 Male, age 76, both hemispheres 36.2
2620 Female, age 94, left hemisphere 34.6
1891 Female, age 85, both hemispheres 31.7
2436 Male, age 74, both hemispheres 30.8
Parahippocampal cortex
nTPM: 33.6
1850 Male, age 80, both hemispheres 38.5
1933 Female, age 85, both hemispheres 35.9
2692 Male, age 74, both hemispheres 34.6
2245 Female, age 91, both hemispheres 33.9
2532 Female, age 72, left hemisphere 33.5
2622 Female, age 67, right hemisphere 32.9
2693 Female, age 94, both hemispheres 32.6
1990 Female, age 91, right hemisphere 32.4
2250 Female, age 67, right hemisphere 32.0
2018 Male, age 76, both hemispheres 29.9
Perirhinal gyrus
nTPM: 38.2
1794 Male, age 80, right hemisphere 46.6
1847 Female, age 91, left hemisphere 39.3
1841 Female, age 85, right hemisphere 36.3
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.4
Subiculum
nTPM: 32.7
1901 Male, age 80, both hemispheres 35.3
1977 Female, age 85, both hemispheres 34.8
2729 Female, age 91, right hemisphere 32.3
2619 Male, age 74, both hemispheres 32.0
2042 Male, age 76, both hemispheres 31.4
2438 Female, age 94, left hemisphere 30.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.5
Samples: 197

Max nTPM: 71.7
Min nTPM: 19.9
Std nTPM: 8.1
Median nTPM: 37.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 71.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 61.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 60.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 59.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 58.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 57.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 56.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 55.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 54.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 53.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.9
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 60.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.9
Samples: 4

Max nTPM: 49.7
Min nTPM: 33.6
Sample A Female 49.7
Sample B Female 44.5
Sample C Male 33.6
Sample D Male 35.6
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 33.5
Sample A Female 37.9
Sample B Female 34.2
Sample C Male 38.0
Sample D Male 33.5
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 48.9
Min nTPM: 33.7
Sample A Female 48.9
Sample B Female 36.9
Sample C Male 37.5
Sample D Male 33.7
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 55.8
Min nTPM: 30.8
Sample A Female 42.4
Sample B Female 30.8
Sample C Male 55.8
Sample D Male 48.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.4
Samples: 4

Max nTPM: 80.0
Min nTPM: 66.7
Sample A Male 68.9
Sample B Male 66.7
Sample C Female 69.9
Sample D Female 80.0
Hippocampal formation
nTPM: 79.2
Samples: 4

Max nTPM: 86.5
Min nTPM: 73.2
Sample A Male 73.2
Sample B Male 82.3
Sample C Female 86.5
Sample D Female 74.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
70918766 Antisense, RP_050712_04_D12, Mouse strain C57BL/6J (56 days, male) 1.1

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