ABOUTMENU
HELP
NEWS
SH3GL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:37.7 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:32.5 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021485
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
2148 Female, age 91, left hemisphere 36.4
1911 Female, age 85, right hemisphere 32.1
2621 Female, age 67, right hemisphere 29.9
1855 Male, age 76, left hemisphere 28.2
2529 Female, age 94, left hemisphere 25.2
1898 Male, age 80, left hemisphere 24.9
Dentate gyrus
nTPM: 31.3
2531 Female, age 67, both hemispheres 39.1
1927 Female, age 91, both hemispheres 33.8
2530 Female, age 94, left hemisphere 32.8
2010 Male, age 76, both hemispheres 28.7
2246 Female, age 85, both hemispheres 27.3
2528 Male, age 74, both hemispheres 26.1
Entorhinal gyrus
nTPM: 27.4
2613 Female, age 94, left hemisphere 30.7
2686 Male, age 75, right hemisphere 29.2
2764 Male, age 80, right hemisphere 27.5
1787 Male, age 76, left hemisphere 27.0
1938 Female, age 85, left hemisphere 26.1
2117 Female, age 91, right hemisphere 24.2
Hippocampus, CA1
nTPM: 30.5
2749 Male, age 80, left hemisphere 36.0
1873 Female, age 85, both hemispheres 33.4
2045 Male, age 76, both hemispheres 32.4
2082 Female, age 91, right hemisphere 25.7
2527 Male, age 74, both hemispheres 25.1
Hippocampus, CA2
nTPM: 26.4
1892 Male, age 76, both hemispheres 29.5
1963 Male, age 80, left hemisphere 27.7
2437 Female, age 94, left hemisphere 27.2
1940 Female, age 85, left hemisphere 25.6
2113 Female, age 91, right hemisphere 24.4
2249 Male, age 74, both hemispheres 23.8
Hippocampus, CA3
nTPM: 34.4
2620 Female, age 94, left hemisphere 45.1
2861 Female, age 67, both hemispheres 40.6
2137 Male, age 80, left hemisphere 37.1
1867 Male, age 76, both hemispheres 29.1
2436 Male, age 74, both hemispheres 27.7
1891 Female, age 85, both hemispheres 26.9
Parahippocampal cortex
nTPM: 26.1
2622 Female, age 67, right hemisphere 33.3
2532 Female, age 72, left hemisphere 28.5
2693 Female, age 94, both hemispheres 26.6
2245 Female, age 91, both hemispheres 26.3
2692 Male, age 74, both hemispheres 26.0
2018 Male, age 76, both hemispheres 25.4
1933 Female, age 85, both hemispheres 24.7
1990 Female, age 91, right hemisphere 24.5
2250 Female, age 67, right hemisphere 23.1
1850 Male, age 80, both hemispheres 23.0
Perirhinal gyrus
nTPM: 24.8
1841 Female, age 85, right hemisphere 25.4
1794 Male, age 80, right hemisphere 25.1
2521 Female, age 94, right hemisphere 25.0
2848 Male, age 76, right hemisphere 24.6
1847 Female, age 91, left hemisphere 23.9
Subiculum
nTPM: 24.8
2042 Male, age 76, both hemispheres 29.2
2729 Female, age 91, right hemisphere 27.5
1901 Male, age 80, both hemispheres 26.6
2619 Male, age 74, both hemispheres 24.3
1977 Female, age 85, both hemispheres 23.5
2438 Female, age 94, left hemisphere 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.7
Samples: 197

Max nTPM: 83.4
Min nTPM: 16.9
Std nTPM: 12.2
Median nTPM: 36.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 83.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 76.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 68.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 67.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 65.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 64.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 64.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 62.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 61.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 61.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 60.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10153-102I9 76 years, female 33.5
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 21.8
Min nTPM: 15.5
Sample A Female 21.8
Sample B Female 18.1
Sample C Male 19.2
Sample D Male 15.5
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.0
Sample A Female 18.5
Sample B Female 17.3
Sample C Male 17.0
Sample D Male 16.0
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.0
Sample A Female 21.1
Sample B Female 16.2
Sample C Male 15.3
Sample D Male 15.0
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.7
Sample A Female 17.0
Sample B Female 14.7
Sample C Male 21.3
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 27.8
Min nTPM: 23.6
Sample A Male 23.6
Sample B Male 27.8
Sample C Female 26.7
Sample D Female 24.1
Hippocampal formation
nTPM: 32.5
Samples: 4

Max nTPM: 35.8
Min nTPM: 28.2
Sample A Male 28.2
Sample B Male 31.8
Sample C Female 35.8
Sample D Female 34.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
72001869 Antisense, RP_050915_02_E01, Mouse strain C57BL/6J (56 days, male) 3.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.