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DCAF6
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.5 nTPM
HPA:20.5 nTPM
GTEx:17.8 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:43.1 nTPM
Mouse:62.4 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 13.3
2621 Female, age 67, right hemisphere 11.9
2148 Female, age 91, left hemisphere 10.7
1855 Male, age 76, left hemisphere 10.1
2529 Female, age 94, left hemisphere 9.1
1911 Female, age 85, right hemisphere 8.4
Dentate gyrus
nTPM: 11.0
1927 Female, age 91, both hemispheres 14.7
2010 Male, age 76, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.8
2246 Female, age 85, both hemispheres 10.8
2530 Female, age 94, left hemisphere 10.2
2528 Male, age 74, both hemispheres 6.2
Entorhinal gyrus
nTPM: 11.5
2613 Female, age 94, left hemisphere 13.9
1787 Male, age 76, left hemisphere 12.9
1938 Female, age 85, left hemisphere 12.6
2764 Male, age 80, right hemisphere 12.5
2686 Male, age 75, right hemisphere 10.2
2117 Female, age 91, right hemisphere 6.7
Hippocampus, CA1
nTPM: 12.8
2749 Male, age 80, left hemisphere 21.5
1873 Female, age 85, both hemispheres 12.8
2045 Male, age 76, both hemispheres 11.2
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 8.6
Hippocampus, CA2
nTPM: 11.6
1892 Male, age 76, both hemispheres 16.4
1963 Male, age 80, left hemisphere 15.2
1940 Female, age 85, left hemisphere 11.7
2437 Female, age 94, left hemisphere 10.0
2113 Female, age 91, right hemisphere 8.8
2249 Male, age 74, both hemispheres 7.5
Hippocampus, CA3
nTPM: 12.2
2137 Male, age 80, left hemisphere 18.2
1867 Male, age 76, both hemispheres 13.8
2861 Female, age 67, both hemispheres 11.6
2620 Female, age 94, left hemisphere 10.5
2436 Male, age 74, both hemispheres 10.0
1891 Female, age 85, both hemispheres 9.1
Parahippocampal cortex
nTPM: 13.6
1850 Male, age 80, both hemispheres 18.7
1933 Female, age 85, both hemispheres 15.1
2532 Female, age 72, left hemisphere 14.9
2245 Female, age 91, both hemispheres 14.7
2622 Female, age 67, right hemisphere 13.6
2693 Female, age 94, both hemispheres 13.3
2018 Male, age 76, both hemispheres 13.0
2250 Female, age 67, right hemisphere 12.6
1990 Female, age 91, right hemisphere 12.2
2692 Male, age 74, both hemispheres 8.1
Perirhinal gyrus
nTPM: 20.5
1841 Female, age 85, right hemisphere 25.1
1794 Male, age 80, right hemisphere 23.0
2521 Female, age 94, right hemisphere 19.9
1847 Female, age 91, left hemisphere 18.7
2848 Male, age 76, right hemisphere 15.6
Subiculum
nTPM: 9.3
1901 Male, age 80, both hemispheres 10.9
2438 Female, age 94, left hemisphere 10.9
1977 Female, age 85, both hemispheres 10.8
2042 Male, age 76, both hemispheres 8.3
2619 Male, age 74, both hemispheres 7.5
2729 Female, age 91, right hemisphere 7.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 54.5
Min nTPM: 6.1
Std nTPM: 9.3
Median nTPM: 15.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 52.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 49.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 44.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 42.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 37.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 34.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.7
FF:10153-102I9 76 years, female 66.8
FF:10169-103B7 60 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 28.4
Sample A Female 30.9
Sample B Female 31.2
Sample C Male 32.3
Sample D Male 28.4
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 39.2
Sample A Female 39.2
Sample B Female 50.1
Sample C Male 42.3
Sample D Male 40.7
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 33.3
Min nTPM: 28.7
Sample A Female 33.3
Sample B Female 28.7
Sample C Male 29.1
Sample D Male 28.7
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 31.2
Min nTPM: 25.8
Sample A Female 27.7
Sample B Female 27.1
Sample C Male 25.8
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.4
Samples: 4

Max nTPM: 65.4
Min nTPM: 58.7
Sample A Male 58.7
Sample B Male 65.2
Sample C Female 60.3
Sample D Female 65.4
Hippocampal formation
nTPM: 59.3
Samples: 4

Max nTPM: 68.4
Min nTPM: 53.1
Sample A Male 68.4
Sample B Male 62.2
Sample C Female 53.1
Sample D Female 53.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71283450 Antisense, RP_050825_01_A04, Mouse strain C57BL/6J (56 days, male) 0.5

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