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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.3 nTPM
HPA:11.3 nTPM
GTEx:9.0 nTPM
FANTOM5:48.5 Scaled Tags Per Million
Pig:11.7 nTPM
Mouse:21.4 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028626
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.0
2529 Female, age 94, left hemisphere 10.5
2148 Female, age 91, left hemisphere 10.3
1898 Male, age 80, left hemisphere 10.1
2621 Female, age 67, right hemisphere 10.1
1855 Male, age 76, left hemisphere 9.6
1911 Female, age 85, right hemisphere 9.2
Dentate gyrus
nTPM: 9.9
2530 Female, age 94, left hemisphere 10.4
1927 Female, age 91, both hemispheres 10.1
2246 Female, age 85, both hemispheres 10.1
2528 Male, age 74, both hemispheres 9.9
2531 Female, age 67, both hemispheres 9.6
2010 Male, age 76, both hemispheres 9.3
Entorhinal gyrus
nTPM: 11.1
2764 Male, age 80, right hemisphere 12.3
2613 Female, age 94, left hemisphere 12.0
1938 Female, age 85, left hemisphere 10.8
2117 Female, age 91, right hemisphere 10.6
2686 Male, age 75, right hemisphere 10.5
1787 Male, age 76, left hemisphere 10.4
Hippocampus, CA1
nTPM: 10.1
2749 Male, age 80, left hemisphere 10.9
2082 Female, age 91, right hemisphere 10.3
2527 Male, age 74, both hemispheres 10.2
1873 Female, age 85, both hemispheres 10.0
2045 Male, age 76, both hemispheres 9.3
Hippocampus, CA2
nTPM: 10.4
2437 Female, age 94, left hemisphere 11.1
1892 Male, age 76, both hemispheres 11.0
1963 Male, age 80, left hemisphere 10.7
2113 Female, age 91, right hemisphere 10.1
2249 Male, age 74, both hemispheres 9.7
1940 Female, age 85, left hemisphere 9.6
Hippocampus, CA3
nTPM: 10.3
2620 Female, age 94, left hemisphere 11.5
1867 Male, age 76, both hemispheres 10.4
2436 Male, age 74, both hemispheres 10.4
1891 Female, age 85, both hemispheres 10.2
2137 Male, age 80, left hemisphere 9.7
2861 Female, age 67, both hemispheres 9.4
Parahippocampal cortex
nTPM: 10.6
1850 Male, age 80, both hemispheres 11.4
2532 Female, age 72, left hemisphere 11.4
1990 Female, age 91, right hemisphere 11.2
2692 Male, age 74, both hemispheres 11.0
2622 Female, age 67, right hemisphere 10.8
1933 Female, age 85, both hemispheres 10.2
2245 Female, age 91, both hemispheres 10.2
2693 Female, age 94, both hemispheres 10.2
2250 Female, age 67, right hemisphere 10.1
2018 Male, age 76, both hemispheres 9.9
Perirhinal gyrus
nTPM: 11.3
2848 Male, age 76, right hemisphere 12.0
1794 Male, age 80, right hemisphere 11.4
1847 Female, age 91, left hemisphere 11.1
1841 Female, age 85, right hemisphere 11.0
2521 Female, age 94, right hemisphere 10.9
Subiculum
nTPM: 9.8
1977 Female, age 85, both hemispheres 10.8
2619 Male, age 74, both hemispheres 10.3
2729 Female, age 91, right hemisphere 10.0
1901 Male, age 80, both hemispheres 9.5
2438 Female, age 94, left hemisphere 9.1
2042 Male, age 76, both hemispheres 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.0
Samples: 197

Max nTPM: 15.5
Min nTPM: 3.6
Std nTPM: 2.2
Median nTPM: 9.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 15.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 15.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 14.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 14.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 13.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 13.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 13.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 13.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 13.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 12.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.5
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 36.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 11.1
Sample C Male 11.8
Sample D Male 12.5
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.7
Sample A Female 10.0
Sample B Female 11.1
Sample C Male 10.9
Sample D Male 9.7
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.2
Sample A Female 11.0
Sample B Female 11.2
Sample C Male 12.3
Sample D Male 9.2
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.6
Sample A Female 10.2
Sample B Female 9.6
Sample C Male 13.2
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 19.5
Sample A Male 19.5
Sample B Male 21.2
Sample C Female 20.9
Sample D Female 20.6
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 22.2
Min nTPM: 20.6
Sample A Male 21.2
Sample B Male 21.7
Sample C Female 20.6
Sample D Female 22.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
71832963 Antisense, RP_051005_04_A03, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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