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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:125.5 nTPM
HPA:125.5 nTPM
GTEx:111.9 nTPM
FANTOM5:56.6 Scaled Tags Per Million
Pig:56.0 nTPM
Mouse:82.5 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027262Antibody HPA078737
Glial cells MediumHigh
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 125.5
Sample id Sample description nTPM
Hippocampus
nTPM: 114.8
1911 Female, age 85, right hemisphere 119.9
2529 Female, age 94, left hemisphere 116.4
1855 Male, age 76, left hemisphere 115.0
1898 Male, age 80, left hemisphere 113.3
2621 Female, age 67, right hemisphere 112.7
2148 Female, age 91, left hemisphere 111.4
Dentate gyrus
nTPM: 115.9
2530 Female, age 94, left hemisphere 133.6
2528 Male, age 74, both hemispheres 121.5
2010 Male, age 76, both hemispheres 117.6
2246 Female, age 85, both hemispheres 112.5
2531 Female, age 67, both hemispheres 106.9
1927 Female, age 91, both hemispheres 103.4
Entorhinal gyrus
nTPM: 116.6
2117 Female, age 91, right hemisphere 139.0
2764 Male, age 80, right hemisphere 117.9
1938 Female, age 85, left hemisphere 112.0
1787 Male, age 76, left hemisphere 111.4
2686 Male, age 75, right hemisphere 110.1
2613 Female, age 94, left hemisphere 109.2
Hippocampus, CA1
nTPM: 108.0
2527 Male, age 74, both hemispheres 116.0
2082 Female, age 91, right hemisphere 114.3
1873 Female, age 85, both hemispheres 109.7
2749 Male, age 80, left hemisphere 102.4
2045 Male, age 76, both hemispheres 97.7
Hippocampus, CA2
nTPM: 117.4
2249 Male, age 74, both hemispheres 126.9
1963 Male, age 80, left hemisphere 124.1
1940 Female, age 85, left hemisphere 116.8
2437 Female, age 94, left hemisphere 116.4
2113 Female, age 91, right hemisphere 115.3
1892 Male, age 76, both hemispheres 104.6
Hippocampus, CA3
nTPM: 111.0
1891 Female, age 85, both hemispheres 127.2
2436 Male, age 74, both hemispheres 121.6
1867 Male, age 76, both hemispheres 113.4
2620 Female, age 94, left hemisphere 104.2
2137 Male, age 80, left hemisphere 99.9
2861 Female, age 67, both hemispheres 99.5
Parahippocampal cortex
nTPM: 110.6
2532 Female, age 72, left hemisphere 121.5
2018 Male, age 76, both hemispheres 116.3
2692 Male, age 74, both hemispheres 115.6
1990 Female, age 91, right hemisphere 115.5
1850 Male, age 80, both hemispheres 111.6
2245 Female, age 91, both hemispheres 108.8
1933 Female, age 85, both hemispheres 106.3
2693 Female, age 94, both hemispheres 106.0
2250 Female, age 67, right hemisphere 103.9
2622 Female, age 67, right hemisphere 100.2
Perirhinal gyrus
nTPM: 104.2
2521 Female, age 94, right hemisphere 106.9
2848 Male, age 76, right hemisphere 105.7
1841 Female, age 85, right hemisphere 103.4
1794 Male, age 80, right hemisphere 102.7
1847 Female, age 91, left hemisphere 102.3
Subiculum
nTPM: 125.5
2042 Male, age 76, both hemispheres 145.5
1901 Male, age 80, both hemispheres 129.0
1977 Female, age 85, both hemispheres 122.8
2619 Male, age 74, both hemispheres 119.0
2729 Female, age 91, right hemisphere 118.8
2438 Female, age 94, left hemisphere 117.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.9
Samples: 197

Max nTPM: 321.2
Min nTPM: 31.8
Std nTPM: 54.7
Median nTPM: 100.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 321.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 267.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 260.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 255.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 244.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 243.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 241.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 236.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 234.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 234.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 232.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.6
FF:10153-102I9 76 years, female 81.9
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.0
Samples: 4

Max nTPM: 87.8
Min nTPM: 17.7
Sample A Female 87.8
Sample B Female 40.2
Sample C Male 78.4
Sample D Male 17.7
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 28.1
Min nTPM: 17.1
Sample A Female 19.4
Sample B Female 28.1
Sample C Male 17.1
Sample D Male 17.3
Subiculum
nTPM: 23.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 17.8
Sample A Female 24.2
Sample B Female 27.7
Sample C Male 17.8
Sample D Male 26.0
Ventral hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 47.3
Min nTPM: 20.5
Sample A Female 41.1
Sample B Female 20.5
Sample C Male 35.2
Sample D Male 47.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.4
Samples: 4

Max nTPM: 56.9
Min nTPM: 30.8
Sample A Male 56.9
Sample B Male 48.6
Sample C Female 53.4
Sample D Female 30.8
Hippocampal formation
nTPM: 82.6
Samples: 4

Max nTPM: 113.6
Min nTPM: 64.4
Sample A Male 64.4
Sample B Male 66.8
Sample C Female 113.6
Sample D Female 85.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68196984 Antisense, RP_041018_01_A02, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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