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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:161.6 nTPM
HPA:161.6 nTPM
GTEx:158.1 nTPM
FANTOM5:90.8 Scaled Tags Per Million
Pig:73.9 nTPM
Mouse:318.9 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051294
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.6
Sample id Sample description nTPM
Hippocampus
nTPM: 135.2
1898 Male, age 80, left hemisphere 147.0
2621 Female, age 67, right hemisphere 140.3
1855 Male, age 76, left hemisphere 134.0
2148 Female, age 91, left hemisphere 131.9
2529 Female, age 94, left hemisphere 129.7
1911 Female, age 85, right hemisphere 128.4
Dentate gyrus
nTPM: 139.0
2530 Female, age 94, left hemisphere 150.9
1927 Female, age 91, both hemispheres 148.2
2531 Female, age 67, both hemispheres 143.9
2010 Male, age 76, both hemispheres 137.9
2246 Female, age 85, both hemispheres 136.1
2528 Male, age 74, both hemispheres 117.0
Entorhinal gyrus
nTPM: 149.1
2613 Female, age 94, left hemisphere 162.2
2686 Male, age 75, right hemisphere 158.3
2764 Male, age 80, right hemisphere 152.8
1938 Female, age 85, left hemisphere 152.1
1787 Male, age 76, left hemisphere 149.9
2117 Female, age 91, right hemisphere 119.3
Hippocampus, CA1
nTPM: 144.5
2749 Male, age 80, left hemisphere 179.4
2045 Male, age 76, both hemispheres 154.2
1873 Female, age 85, both hemispheres 139.7
2527 Male, age 74, both hemispheres 129.1
2082 Female, age 91, right hemisphere 120.4
Hippocampus, CA2
nTPM: 139.8
1892 Male, age 76, both hemispheres 162.4
1940 Female, age 85, left hemisphere 146.1
1963 Male, age 80, left hemisphere 144.1
2437 Female, age 94, left hemisphere 143.6
2113 Female, age 91, right hemisphere 124.1
2249 Male, age 74, both hemispheres 118.6
Hippocampus, CA3
nTPM: 145.8
2137 Male, age 80, left hemisphere 167.0
1867 Male, age 76, both hemispheres 159.6
2861 Female, age 67, both hemispheres 146.8
2620 Female, age 94, left hemisphere 145.9
1891 Female, age 85, both hemispheres 136.2
2436 Male, age 74, both hemispheres 119.3
Parahippocampal cortex
nTPM: 148.5
1850 Male, age 80, both hemispheres 167.1
2532 Female, age 72, left hemisphere 157.8
1933 Female, age 85, both hemispheres 152.1
2622 Female, age 67, right hemisphere 150.3
2245 Female, age 91, both hemispheres 149.9
2693 Female, age 94, both hemispheres 148.5
1990 Female, age 91, right hemisphere 146.1
2018 Male, age 76, both hemispheres 138.9
2250 Female, age 67, right hemisphere 138.3
2692 Male, age 74, both hemispheres 136.3
Perirhinal gyrus
nTPM: 161.6
1847 Female, age 91, left hemisphere 171.0
1794 Male, age 80, right hemisphere 169.4
1841 Female, age 85, right hemisphere 164.5
2521 Female, age 94, right hemisphere 153.4
2848 Male, age 76, right hemisphere 149.5
Subiculum
nTPM: 138.8
1901 Male, age 80, both hemispheres 152.0
2438 Female, age 94, left hemisphere 149.2
1977 Female, age 85, both hemispheres 146.5
2042 Male, age 76, both hemispheres 135.3
2619 Male, age 74, both hemispheres 131.0
2729 Female, age 91, right hemisphere 119.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 158.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.1
Samples: 197

Max nTPM: 373.4
Min nTPM: 75.7
Std nTPM: 50.6
Median nTPM: 147.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 373.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 329.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 322.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 311.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 306.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 291.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 282.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 277.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 276.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 265.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 262.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.8
FF:10153-102I9 76 years, female 106.3
FF:10169-103B7 60 years, female 75.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.9
Samples: 4

Max nTPM: 101.0
Min nTPM: 50.4
Sample A Female 101.0
Sample B Female 75.8
Sample C Male 50.4
Sample D Male 68.3
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 77.0
Min nTPM: 55.5
Sample A Female 76.7
Sample B Female 77.0
Sample C Male 55.5
Sample D Male 57.7
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 68.2
Min nTPM: 38.2
Sample A Female 68.2
Sample B Female 38.9
Sample C Male 38.5
Sample D Male 38.2
Ventral hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 82.3
Min nTPM: 34.7
Sample A Female 49.2
Sample B Female 34.7
Sample C Male 47.3
Sample D Male 82.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 318.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 318.9
Samples: 4

Max nTPM: 359.8
Min nTPM: 294.6
Sample A Male 309.3
Sample B Male 359.8
Sample C Female 294.6
Sample D Female 311.7
Hippocampal formation
nTPM: 266.6
Samples: 4

Max nTPM: 304.1
Min nTPM: 244.5
Sample A Male 304.1
Sample B Male 266.9
Sample C Female 244.5
Sample D Female 251.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
73513729 Antisense, RP_051121_02_F07, Mouse strain C57BL/6J (56 days, male) 8.5

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