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GOLPH3L
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.3 nTPM
HPA:9.3 nTPM
GTEx:7.2 nTPM
FANTOM5:50.4 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:21.6 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 9.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 7.7
2288 Male, age 75, left hemisphere 8.3
2846 Female, age 79, unknown 8.2
2290 Female, age 72, unknown 8.1
2481 Female, age 94, left hemisphere 8.1
2289 Male, age 61, right hemisphere 7.4
1857 Female, age 85, left hemisphere 7.2
1854 Male, age 80, left hemisphere 7.0
1781 Male, age 74, unknown 6.9
Claustrum
nTPM: 6.9
2198 Male, age 80, both hemispheres 7.4
2284 Female, age 91, both hemispheres 7.4
2196 Female, age 79, unknown 7.1
2392 Female, age 94, both hemispheres 7.1
2292 Female, age 85, both hemispheres 6.8
1956 Male, age 74, unknown 6.7
2645 Female, age 72, unknown 6.7
2568 Male, age 61, both hemispheres 6.4
2491 Male, age 75, both hemispheres 6.3
Globus pallidus, externus
nTPM: 7.3
2395 Male, age 75, both hemispheres 8.3
2772 Female, age 79, unknown 8.2
1996 Male, age 80, right hemisphere 7.8
2646 Male, age 61, right hemisphere 6.4
2567 Female, age 72, unknown 5.9
Globus pallidus, internus
nTPM: 7.6
2483 Female, age 94, right hemisphere 9.1
1818 Male, age 74, unknown 8.0
2287 Male, age 75, right hemisphere 7.9
2037 Male, age 80, right hemisphere 7.5
2778 Female, age 91, both hemispheres 7.4
2111 Female, age 85, right hemisphere 6.7
2566 Female, age 72, unknown 6.4
Nucleus accumbens
nTPM: 7.6
1856 Female, age 91, right hemisphere 8.6
2286 Male, age 75, left hemisphere 8.5
2698 Female, age 72, unknown 7.9
2824 Male, age 61, right hemisphere 7.5
1783 Male, age 74, unknown 7.3
2391 Female, age 94, left hemisphere 7.2
1806 Female, age 85, left hemisphere 7.0
2732 Male, age 80, right hemisphere 6.9
Nucleus basalis of Meynert
nTPM: 7.2
2821 Male, age 75, both hemispheres 8.1
2393 Male, age 80, right hemisphere 7.4
2484 Female, age 94, left hemisphere 7.0
2569 Male, age 61, both hemispheres 6.5
Nucleus of the diagonal band
nTPM: 9.3
1979 Male, age 74, unknown 9.7
1812 Female, age 91, both hemispheres 9.4
2775 Male, age 80, right hemisphere 9.3
2195 Female, age 85, both hemispheres 9.0
2029 Male, age 61, right hemisphere 8.9
Olfactory tubercle
nTPM: 8.1
1846 Male, age 80, right hemisphere 8.6
1998 Female, age 91, both hemispheres 8.6
2856 Male, age 75, right hemisphere 8.2
2487 Female, age 94, left hemisphere 7.0
Putamen
nTPM: 7.2
2482 Female, age 94, left hemisphere 8.4
2466 Female, age 79, unknown 7.7
1829 Male, age 74, unknown 7.4
1838 Male, age 80, right hemisphere 7.3
1937 Female, age 91, right hemisphere 7.2
2647 Male, age 75, left hemisphere 6.5
2489 Female, age 72, unknown 6.2
Septal nuclei
nTPM: 8.6
2009 Female, age 91, both hemispheres 10.2
2629 Female, age 94, right hemisphere 9.4
2031 Female, age 72, unknown 9.2
1960 Male, age 74, unknown 8.8
2199 Male, age 80, right hemisphere 8.5
2394 Male, age 61, left hemisphere 7.3
2059 Female, age 85, both hemispheres 7.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 7.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 6.9
Samples: 246

Max nTPM: 18.2
Min nTPM: 4.1
Std nTPM: 1.8
Median nTPM: 6.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 15.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 13.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 13.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 13.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 11.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 11.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 11.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 10.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 10.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.2
Samples: 246

Max nTPM: 14.2
Min nTPM: 3.6
Std nTPM: 1.6
Median nTPM: 6.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 14.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 13.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 12.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 12.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 11.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 10.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 10.7
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Brain - Putamen (basal ganglia)
Average nTPM: 5.9
Samples: 205

Max nTPM: 11.3
Min nTPM: 3.6
Std nTPM: 1.2
Median nTPM: 5.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 11.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 11.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 10.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 9.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 8.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 8.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 8.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 50.4
FF:10164-103B2 76 years, female 50.4
Globus pallidus
Scaled Tags Per Million: 30.2
FF:10161-103A8 76 years, female 38.3
FF:10175-103C4 60 years, female 22.1
Nucleus accumbens
Scaled Tags Per Million: 42.1
FF:10037-101F1 23-56 years, mixed 42.1
Putamen
Scaled Tags Per Million: 34.8
FF:10176-103C5 60 years, female 34.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 22.4
Pig sample Sample description nTPM
Caudate
nTPM: 15.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 13.8
Sample A Female 16.7
Sample B Female 15.8
Sample C Male 16.4
Sample D Male 13.8
Putamen
nTPM: 19.9
Samples: 4

Max nTPM: 24.7
Min nTPM: 14.3
Sample A Female 24.7
Sample B Female 14.3
Sample C Male 22.8
Sample D Male 17.7
Septum
nTPM: 22.4
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.9
Sample A Female 18.9
Sample B Female 19.7
Sample C Male 27.1
Sample D Male 23.8
Ventral pallidum
nTPM: 18.0
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 20.9
Sample C Male 19.5
Sample D Male 16.8

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 21.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 18.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 17.5
Sample A Male 18.0
Sample B Male 17.5
Sample C Female 18.8
Sample D Female 18.6
Septum
nTPM: 21.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 21.9
Sample C Female 22.1
Sample D Female 21.9
Ventral forebrain
nTPM: 16.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.2
Sample A Male 15.2
Sample B Male 16.7
Sample C Female 17.1
Sample D Female 18.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
532709 Antisense, RP_040825_01_F08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.1
532709 Antisense, RP_040825_01_F08, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.