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UBAP2L
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:32.0 nTPM
HPA:32.0 nTPM
GTEx:34.6 nTPM
FANTOM5:92.4 Scaled Tags Per Million
Pig:63.8 nTPM
Mouse:57.9 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035068
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1855 Male, age 76, left hemisphere 32.5
2621 Female, age 67, right hemisphere 31.0
2529 Female, age 94, left hemisphere 30.4
2148 Female, age 91, left hemisphere 26.6
1898 Male, age 80, left hemisphere 25.6
1911 Female, age 85, right hemisphere 25.0
Dentate gyrus
nTPM: 27.3
2010 Male, age 76, both hemispheres 30.7
2531 Female, age 67, both hemispheres 30.0
2246 Female, age 85, both hemispheres 28.9
2530 Female, age 94, left hemisphere 26.4
1927 Female, age 91, both hemispheres 26.3
2528 Male, age 74, both hemispheres 21.6
Entorhinal gyrus
nTPM: 28.9
2613 Female, age 94, left hemisphere 31.6
1787 Male, age 76, left hemisphere 30.5
2764 Male, age 80, right hemisphere 30.3
2686 Male, age 75, right hemisphere 28.8
1938 Female, age 85, left hemisphere 27.6
2117 Female, age 91, right hemisphere 24.6
Hippocampus, CA1
nTPM: 27.9
2045 Male, age 76, both hemispheres 35.0
2749 Male, age 80, left hemisphere 29.6
2527 Male, age 74, both hemispheres 26.6
1873 Female, age 85, both hemispheres 26.4
2082 Female, age 91, right hemisphere 21.7
Hippocampus, CA2
nTPM: 25.3
1892 Male, age 76, both hemispheres 31.5
2437 Female, age 94, left hemisphere 28.0
1940 Female, age 85, left hemisphere 26.8
2113 Female, age 91, right hemisphere 23.9
1963 Male, age 80, left hemisphere 21.1
2249 Male, age 74, both hemispheres 20.5
Hippocampus, CA3
nTPM: 28.9
2620 Female, age 94, left hemisphere 32.7
2861 Female, age 67, both hemispheres 31.6
2137 Male, age 80, left hemisphere 29.4
1867 Male, age 76, both hemispheres 27.6
2436 Male, age 74, both hemispheres 26.8
1891 Female, age 85, both hemispheres 25.2
Parahippocampal cortex
nTPM: 30.9
2245 Female, age 91, both hemispheres 37.6
2532 Female, age 72, left hemisphere 33.6
2622 Female, age 67, right hemisphere 32.1
1850 Male, age 80, both hemispheres 31.9
2692 Male, age 74, both hemispheres 30.8
2018 Male, age 76, both hemispheres 30.0
2693 Female, age 94, both hemispheres 30.0
1933 Female, age 85, both hemispheres 28.8
2250 Female, age 67, right hemisphere 28.6
1990 Female, age 91, right hemisphere 25.8
Perirhinal gyrus
nTPM: 32.0
2521 Female, age 94, right hemisphere 33.5
1847 Female, age 91, left hemisphere 32.2
1794 Male, age 80, right hemisphere 32.1
1841 Female, age 85, right hemisphere 31.3
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 28.0
2438 Female, age 94, left hemisphere 38.2
2619 Male, age 74, both hemispheres 30.2
2042 Male, age 76, both hemispheres 28.2
1901 Male, age 80, both hemispheres 26.4
1977 Female, age 85, both hemispheres 25.3
2729 Female, age 91, right hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 51.5
Min nTPM: 24.0
Std nTPM: 5.3
Median nTPM: 34.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 51.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 50.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 48.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 47.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 46.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.4
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 81.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 71.5
Min nTPM: 51.7
Sample A Female 71.5
Sample B Female 59.9
Sample C Male 60.1
Sample D Male 51.7
Entorhinal cortex
nTPM: 60.9
Samples: 4

Max nTPM: 73.6
Min nTPM: 52.5
Sample A Female 73.6
Sample B Female 52.5
Sample C Male 59.7
Sample D Male 57.6
Subiculum
nTPM: 63.8
Samples: 4

Max nTPM: 79.5
Min nTPM: 57.0
Sample A Female 79.5
Sample B Female 57.0
Sample C Male 60.2
Sample D Male 58.3
Ventral hippocampus
nTPM: 59.4
Samples: 4

Max nTPM: 71.5
Min nTPM: 43.3
Sample A Female 59.3
Sample B Female 43.3
Sample C Male 71.5
Sample D Male 63.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.9
Samples: 4

Max nTPM: 67.6
Min nTPM: 50.6
Sample A Male 56.3
Sample B Male 50.6
Sample C Female 57.2
Sample D Female 67.6
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 60.4
Min nTPM: 46.2
Sample A Male 46.2
Sample B Male 60.4
Sample C Female 55.6
Sample D Female 51.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
67767439 Antisense, RP_040916_01_G09, Mouse strain C57BL/6J (56 days, male) 10.6
70919746 Antisense, RP_050713_02_A03, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.