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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:30.0 nTPM
FANTOM5:88.0 Scaled Tags Per Million
Pig:41.3 nTPM
Mouse:85.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050775Antibody HPA076030
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 36.4
1855 Male, age 76, left hemisphere 32.5
1911 Female, age 85, right hemisphere 32.4
2529 Female, age 94, left hemisphere 31.6
2621 Female, age 67, right hemisphere 30.6
2148 Female, age 91, left hemisphere 30.0
Dentate gyrus
nTPM: 32.6
2010 Male, age 76, both hemispheres 35.2
2246 Female, age 85, both hemispheres 32.8
2530 Female, age 94, left hemisphere 32.7
2528 Male, age 74, both hemispheres 32.6
1927 Female, age 91, both hemispheres 31.8
2531 Female, age 67, both hemispheres 30.2
Entorhinal gyrus
nTPM: 32.3
1938 Female, age 85, left hemisphere 35.1
2764 Male, age 80, right hemisphere 34.3
1787 Male, age 76, left hemisphere 32.7
2117 Female, age 91, right hemisphere 31.8
2686 Male, age 75, right hemisphere 30.9
2613 Female, age 94, left hemisphere 28.9
Hippocampus, CA1
nTPM: 33.4
1873 Female, age 85, both hemispheres 35.8
2749 Male, age 80, left hemisphere 34.0
2045 Male, age 76, both hemispheres 33.0
2082 Female, age 91, right hemisphere 32.5
2527 Male, age 74, both hemispheres 31.6
Hippocampus, CA2
nTPM: 33.5
1892 Male, age 76, both hemispheres 37.3
2249 Male, age 74, both hemispheres 34.8
1963 Male, age 80, left hemisphere 33.6
1940 Female, age 85, left hemisphere 32.8
2113 Female, age 91, right hemisphere 31.6
2437 Female, age 94, left hemisphere 31.1
Hippocampus, CA3
nTPM: 31.5
1891 Female, age 85, both hemispheres 34.3
1867 Male, age 76, both hemispheres 33.7
2436 Male, age 74, both hemispheres 32.9
2137 Male, age 80, left hemisphere 31.2
2620 Female, age 94, left hemisphere 29.4
2861 Female, age 67, both hemispheres 27.7
Parahippocampal cortex
nTPM: 33.0
1850 Male, age 80, both hemispheres 36.5
1933 Female, age 85, both hemispheres 35.7
2018 Male, age 76, both hemispheres 34.5
2532 Female, age 72, left hemisphere 34.5
1990 Female, age 91, right hemisphere 33.0
2250 Female, age 67, right hemisphere 32.7
2693 Female, age 94, both hemispheres 32.3
2245 Female, age 91, both hemispheres 31.9
2692 Male, age 74, both hemispheres 29.7
2622 Female, age 67, right hemisphere 29.3
Perirhinal gyrus
nTPM: 35.3
1841 Female, age 85, right hemisphere 38.1
1794 Male, age 80, right hemisphere 36.2
2848 Male, age 76, right hemisphere 35.0
1847 Female, age 91, left hemisphere 34.6
2521 Female, age 94, right hemisphere 32.5
Subiculum
nTPM: 32.7
1977 Female, age 85, both hemispheres 36.3
2042 Male, age 76, both hemispheres 36.1
1901 Male, age 80, both hemispheres 32.9
2729 Female, age 91, right hemisphere 30.8
2438 Female, age 94, left hemisphere 30.2
2619 Male, age 74, both hemispheres 29.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 50.1
Min nTPM: 16.3
Std nTPM: 6.6
Median nTPM: 30.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 50.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 49.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 48.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 47.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 46.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 46.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 41.2
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 41.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.0
FF:10169-103B7 60 years, female 107.7
FF:10153-102I9 76 years, female 68.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 54.2
Min nTPM: 31.2
Sample A Female 54.2
Sample B Female 37.1
Sample C Male 42.8
Sample D Male 31.2
Entorhinal cortex
nTPM: 33.5
Samples: 4

Max nTPM: 37.6
Min nTPM: 26.5
Sample A Female 34.9
Sample B Female 37.6
Sample C Male 35.1
Sample D Male 26.5
Subiculum
nTPM: 34.0
Samples: 4

Max nTPM: 43.2
Min nTPM: 29.4
Sample A Female 43.2
Sample B Female 30.2
Sample C Male 33.2
Sample D Male 29.4
Ventral hippocampus
nTPM: 35.6
Samples: 4

Max nTPM: 44.8
Min nTPM: 27.6
Sample A Female 44.8
Sample B Female 27.6
Sample C Male 37.6
Sample D Male 32.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 77.2
Min nTPM: 66.9
Sample A Male 75.3
Sample B Male 66.9
Sample C Female 77.2
Sample D Female 70.6
Hippocampal formation
nTPM: 85.9
Samples: 4

Max nTPM: 96.8
Min nTPM: 76.6
Sample A Male 96.8
Sample B Male 76.6
Sample C Female 88.0
Sample D Female 82.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73635772 Antisense, RP_050921_01_G11, Mouse strain C57BL/6J (56 days, male) 0.0
71724840 Antisense, RP_050921_01_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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