ABOUTMENU
HELP
NEWS
PDIA6
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:55.9 nTPM
HPA:55.9 nTPM
GTEx:39.9 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:102.7 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034652Antibody HPA034653Antibody CAB034347
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.7
1898 Male, age 80, left hemisphere 58.3
2148 Female, age 91, left hemisphere 55.0
2529 Female, age 94, left hemisphere 54.7
1911 Female, age 85, right hemisphere 54.5
2621 Female, age 67, right hemisphere 53.2
1855 Male, age 76, left hemisphere 52.4
Dentate gyrus
nTPM: 54.7
2010 Male, age 76, both hemispheres 59.6
1927 Female, age 91, both hemispheres 56.6
2246 Female, age 85, both hemispheres 56.3
2528 Male, age 74, both hemispheres 53.5
2530 Female, age 94, left hemisphere 51.3
2531 Female, age 67, both hemispheres 50.8
Entorhinal gyrus
nTPM: 51.1
1938 Female, age 85, left hemisphere 55.8
2117 Female, age 91, right hemisphere 54.3
1787 Male, age 76, left hemisphere 52.5
2764 Male, age 80, right hemisphere 49.1
2686 Male, age 75, right hemisphere 47.8
2613 Female, age 94, left hemisphere 47.2
Hippocampus, CA1
nTPM: 55.9
2045 Male, age 76, both hemispheres 60.8
1873 Female, age 85, both hemispheres 59.3
2527 Male, age 74, both hemispheres 55.1
2749 Male, age 80, left hemisphere 53.9
2082 Female, age 91, right hemisphere 50.4
Hippocampus, CA2
nTPM: 54.3
2249 Male, age 74, both hemispheres 59.6
1892 Male, age 76, both hemispheres 57.9
1963 Male, age 80, left hemisphere 54.2
1940 Female, age 85, left hemisphere 52.4
2113 Female, age 91, right hemisphere 51.6
2437 Female, age 94, left hemisphere 49.8
Hippocampus, CA3
nTPM: 55.3
1867 Male, age 76, both hemispheres 58.7
2436 Male, age 74, both hemispheres 58.1
2620 Female, age 94, left hemisphere 58.1
1891 Female, age 85, both hemispheres 57.1
2137 Male, age 80, left hemisphere 50.7
2861 Female, age 67, both hemispheres 49.1
Parahippocampal cortex
nTPM: 52.3
2018 Male, age 76, both hemispheres 56.2
2250 Female, age 67, right hemisphere 56.1
1933 Female, age 85, both hemispheres 54.4
1990 Female, age 91, right hemisphere 53.0
2245 Female, age 91, both hemispheres 52.0
2532 Female, age 72, left hemisphere 51.9
2692 Male, age 74, both hemispheres 51.4
1850 Male, age 80, both hemispheres 50.8
2693 Female, age 94, both hemispheres 49.2
2622 Female, age 67, right hemisphere 47.8
Perirhinal gyrus
nTPM: 52.4
1841 Female, age 85, right hemisphere 57.5
1847 Female, age 91, left hemisphere 54.2
2521 Female, age 94, right hemisphere 51.4
2848 Male, age 76, right hemisphere 50.1
1794 Male, age 80, right hemisphere 48.9
Subiculum
nTPM: 52.6
2042 Male, age 76, both hemispheres 55.3
1977 Female, age 85, both hemispheres 54.1
2729 Female, age 91, right hemisphere 52.8
1901 Male, age 80, both hemispheres 52.3
2619 Male, age 74, both hemispheres 52.3
2438 Female, age 94, left hemisphere 49.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.9
Samples: 197

Max nTPM: 93.7
Min nTPM: 21.4
Std nTPM: 11.6
Median nTPM: 37.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 93.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 87.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 85.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 82.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 82.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 77.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 75.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 72.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 67.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 64.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 64.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10153-102I9 76 years, female 55.5
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 43.0
Min nTPM: 25.0
Sample A Female 43.0
Sample B Female 33.8
Sample C Male 31.6
Sample D Male 25.0
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 40.8
Min nTPM: 31.4
Sample A Female 38.2
Sample B Female 40.8
Sample C Male 34.7
Sample D Male 31.4
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 26.9
Sample A Female 45.9
Sample B Female 32.1
Sample C Male 26.9
Sample D Male 28.5
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 36.1
Min nTPM: 23.4
Sample A Female 33.6
Sample B Female 23.4
Sample C Male 35.7
Sample D Male 36.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.7
Samples: 4

Max nTPM: 120.7
Min nTPM: 84.9
Sample A Male 84.9
Sample B Male 94.7
Sample C Female 110.6
Sample D Female 120.7
Hippocampal formation
nTPM: 99.6
Samples: 4

Max nTPM: 113.8
Min nTPM: 81.8
Sample A Male 92.3
Sample B Male 81.8
Sample C Female 110.6
Sample D Female 113.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
69079989 Antisense, RP_050324_01_B04, Mouse strain C57BL/6J (56 days, male) 13.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.