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RPS27A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1085.1 nTPM
HPA:1085.1 nTPM
GTEx:957.5 nTPM
FANTOM5:35.6 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:774.6 nTPM
Allen mouse:26.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041344Antibody HPA049132Antibody CAB033319
Glial cells LowLowHigh
Neuronal cells LowMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1085.1
Sample id Sample description nTPM
Hippocampus
nTPM: 1079.9
1898 Male, age 80, left hemisphere 1105.8
2529 Female, age 94, left hemisphere 1086.5
1911 Female, age 85, right hemisphere 1081.6
2621 Female, age 67, right hemisphere 1075.7
1855 Male, age 76, left hemisphere 1067.7
2148 Female, age 91, left hemisphere 1062.1
Dentate gyrus
nTPM: 1078.3
2530 Female, age 94, left hemisphere 1108.6
2010 Male, age 76, both hemispheres 1101.6
1927 Female, age 91, both hemispheres 1074.5
2531 Female, age 67, both hemispheres 1063.8
2246 Female, age 85, both hemispheres 1062.9
2528 Male, age 74, both hemispheres 1058.4
Entorhinal gyrus
nTPM: 1076.5
2686 Male, age 75, right hemisphere 1102.7
2117 Female, age 91, right hemisphere 1077.8
1787 Male, age 76, left hemisphere 1076.7
1938 Female, age 85, left hemisphere 1074.0
2764 Male, age 80, right hemisphere 1071.1
2613 Female, age 94, left hemisphere 1056.9
Hippocampus, CA1
nTPM: 1077.7
2749 Male, age 80, left hemisphere 1100.0
2045 Male, age 76, both hemispheres 1086.6
1873 Female, age 85, both hemispheres 1072.3
2082 Female, age 91, right hemisphere 1069.0
2527 Male, age 74, both hemispheres 1060.6
Hippocampus, CA2
nTPM: 1080.5
1963 Male, age 80, left hemisphere 1101.8
1892 Male, age 76, both hemispheres 1099.0
2437 Female, age 94, left hemisphere 1076.3
1940 Female, age 85, left hemisphere 1071.8
2113 Female, age 91, right hemisphere 1069.0
2249 Male, age 74, both hemispheres 1065.2
Hippocampus, CA3
nTPM: 1072.2
1867 Male, age 76, both hemispheres 1102.6
1891 Female, age 85, both hemispheres 1092.5
2137 Male, age 80, left hemisphere 1080.3
2861 Female, age 67, both hemispheres 1067.7
2436 Male, age 74, both hemispheres 1054.4
2620 Female, age 94, left hemisphere 1035.5
Parahippocampal cortex
nTPM: 1067.9
2018 Male, age 76, both hemispheres 1122.9
1850 Male, age 80, both hemispheres 1075.9
1933 Female, age 85, both hemispheres 1074.4
2250 Female, age 67, right hemisphere 1068.1
1990 Female, age 91, right hemisphere 1064.7
2245 Female, age 91, both hemispheres 1063.2
2692 Male, age 74, both hemispheres 1061.2
2532 Female, age 72, left hemisphere 1054.9
2622 Female, age 67, right hemisphere 1046.9
2693 Female, age 94, both hemispheres 1046.8
Perirhinal gyrus
nTPM: 1068.9
1841 Female, age 85, right hemisphere 1085.0
1847 Female, age 91, left hemisphere 1073.6
2848 Male, age 76, right hemisphere 1071.9
1794 Male, age 80, right hemisphere 1066.8
2521 Female, age 94, right hemisphere 1047.0
Subiculum
nTPM: 1085.1
2042 Male, age 76, both hemispheres 1112.4
2438 Female, age 94, left hemisphere 1106.6
1901 Male, age 80, both hemispheres 1086.7
1977 Female, age 85, both hemispheres 1081.5
2729 Female, age 91, right hemisphere 1066.0
2619 Male, age 74, both hemispheres 1057.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 957.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 957.5
Samples: 197

Max nTPM: 2547.4
Min nTPM: 398.6
Std nTPM: 332.0
Median nTPM: 870.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2547.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2328.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1838.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1821.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1806.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1759.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1698.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1638.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1637.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 1623.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1593.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.6
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 21.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 59.7
Min nTPM: 33.0
Sample A Female 59.7
Sample B Female 42.9
Sample C Male 46.0
Sample D Male 33.0
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 51.6
Min nTPM: 28.3
Sample A Female 33.9
Sample B Female 51.6
Sample C Male 45.2
Sample D Male 28.3
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 53.7
Min nTPM: 30.7
Sample A Female 53.7
Sample B Female 35.8
Sample C Male 30.7
Sample D Male 32.3
Ventral hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 42.9
Min nTPM: 36.7
Sample A Female 42.9
Sample B Female 36.7
Sample C Male 39.5
Sample D Male 38.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 774.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 745.3
Samples: 4

Max nTPM: 816.7
Min nTPM: 705.0
Sample A Male 752.6
Sample B Male 707.0
Sample C Female 816.7
Sample D Female 705.0
Hippocampal formation
nTPM: 774.6
Samples: 4

Max nTPM: 900.9
Min nTPM: 686.3
Sample A Male 900.9
Sample B Male 686.3
Sample C Female 791.2
Sample D Female 720.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.5
100143502 Antisense, RP_110407_01_F02, Mouse strain C57BL/6J (56 days, male) 26.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.