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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:20.9 nTPM
FANTOM5:56.1 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:27.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035102
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
2529 Female, age 94, left hemisphere 19.5
2621 Female, age 67, right hemisphere 18.0
1911 Female, age 85, right hemisphere 14.9
1898 Male, age 80, left hemisphere 14.1
2148 Female, age 91, left hemisphere 14.0
1855 Male, age 76, left hemisphere 13.9
Dentate gyrus
nTPM: 15.9
2010 Male, age 76, both hemispheres 18.3
2530 Female, age 94, left hemisphere 16.4
2246 Female, age 85, both hemispheres 16.2
2531 Female, age 67, both hemispheres 16.0
2528 Male, age 74, both hemispheres 15.1
1927 Female, age 91, both hemispheres 13.3
Entorhinal gyrus
nTPM: 16.4
2117 Female, age 91, right hemisphere 21.1
2686 Male, age 75, right hemisphere 17.6
1787 Male, age 76, left hemisphere 15.3
2613 Female, age 94, left hemisphere 15.1
2764 Male, age 80, right hemisphere 15.1
1938 Female, age 85, left hemisphere 14.4
Hippocampus, CA1
nTPM: 14.0
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.1
2749 Male, age 80, left hemisphere 13.8
1873 Female, age 85, both hemispheres 13.0
2045 Male, age 76, both hemispheres 11.9
Hippocampus, CA2
nTPM: 14.7
1940 Female, age 85, left hemisphere 16.2
1963 Male, age 80, left hemisphere 15.8
2113 Female, age 91, right hemisphere 15.6
2437 Female, age 94, left hemisphere 15.3
2249 Male, age 74, both hemispheres 13.9
1892 Male, age 76, both hemispheres 11.3
Hippocampus, CA3
nTPM: 15.6
2436 Male, age 74, both hemispheres 21.4
2137 Male, age 80, left hemisphere 15.8
1891 Female, age 85, both hemispheres 15.5
2620 Female, age 94, left hemisphere 14.9
1867 Male, age 76, both hemispheres 13.3
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 16.0
2018 Male, age 76, both hemispheres 20.0
2622 Female, age 67, right hemisphere 19.2
2692 Male, age 74, both hemispheres 17.9
2532 Female, age 72, left hemisphere 15.8
2245 Female, age 91, both hemispheres 15.6
1850 Male, age 80, both hemispheres 15.1
1990 Female, age 91, right hemisphere 15.1
2693 Female, age 94, both hemispheres 14.0
2250 Female, age 67, right hemisphere 13.5
1933 Female, age 85, both hemispheres 13.3
Perirhinal gyrus
nTPM: 13.4
1794 Male, age 80, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.7
1841 Female, age 85, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.6
1847 Female, age 91, left hemisphere 11.3
Subiculum
nTPM: 17.6
2438 Female, age 94, left hemisphere 20.7
2042 Male, age 76, both hemispheres 17.8
2729 Female, age 91, right hemisphere 17.2
2619 Male, age 74, both hemispheres 17.0
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 44.6
Min nTPM: 10.8
Std nTPM: 5.6
Median nTPM: 20.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 44.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 42.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 39.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 39.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 34.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 34.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 32.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 29.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.1
FF:10153-102I9 76 years, female 66.3
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.2
Min nTPM: 19.9
Sample A Female 23.5
Sample B Female 21.2
Sample C Male 27.2
Sample D Male 19.9
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.9
Sample A Female 15.5
Sample B Female 17.8
Sample C Male 14.9
Sample D Male 18.2
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.9
Sample A Female 17.9
Sample B Female 18.4
Sample C Male 16.9
Sample D Male 17.6
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 23.8
Min nTPM: 14.6
Sample A Female 18.4
Sample B Female 17.5
Sample C Male 14.6
Sample D Male 23.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 25.6
Sample A Male 25.7
Sample B Male 29.0
Sample C Female 25.6
Sample D Female 30.0
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.2
Sample A Male 17.2
Sample B Male 24.3
Sample C Female 23.1
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
517 Antisense, RP_Baylor_103193, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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