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ARL6IP5
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:93.4 nTPM
HPA:93.4 nTPM
GTEx:93.1 nTPM
FANTOM5:320.0 Scaled Tags Per Million
Pig:60.4 nTPM
Mouse:149.7 nTPM
Allen mouse:11.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 93.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 87.9
2411 Female, age 72, unknown 96.8
2019 Male, age 18, unknown 95.2
1870 Female, age 42, unknown 92.7
1830 Male, age 51, unknown 88.2
1833 Male, age 53, unknown 88.1
1827 Male, age 72, unknown 87.0
2219 Male, age 76, both hemispheres 85.6
2666 Male, age 74, left hemisphere 83.3
2828 Female, age 72, unknown 81.6
2586 Male, age 75, left hemisphere 80.4
Dorsal raphe nucleus
nTPM: 90.9
2298 Female, age 72, unknown 100.0
2750 Male, age 76, both hemispheres 95.0
2047 Male, age 72, unknown 87.7
1828 Male, age 53, unknown 86.4
2016 Female, age 72, unknown 85.5
Inferior colliculus
nTPM: 88.0
2097 Female, age 72, unknown 98.1
1890 Male, age 53, unknown 86.8
1848 Female, age 42, unknown 86.1
2849 Male, age 72, unknown 80.8
Median raphe nucleus
nTPM: 92.6
2220 Male, age 76, midline 92.6
Pedunculopontine tegmental nucleus
nTPM: 93.4
2334 Male, age 80, both hemispheres 94.9
2338 Male, age 61, both hemispheres 93.8
1921 Female, age 85, both hemispheres 91.6
Periaquaductal grey, anterior
nTPM: 90.5
1947 Male, age 18, unknown 98.4
2502 Female, age 75, unknown 88.6
1795 Male, age 51, unknown 84.5
Periaquaductal grey, dorsal
nTPM: 84.1
2464 Female, age 72, unknown 85.5
1831 Male, age 72, unknown 84.6
2850 Male, age 76, both hemispheres 84.4
1840 Male, age 53, unknown 82.0
Periaquaductal grey, lateral
nTPM: 84.5
2272 Male, age 74, both hemispheres 92.4
2053 Male, age 18, unknown 82.9
2140 Male, age 76, both hemispheres 78.3
Pretectal area
nTPM: 92.7
1817 Female, age 42, unknown 102.5
2007 Male, age 72, unknown 100.8
1944 Female, age 72, unknown 97.1
2273 Male, age 74, both hemispheres 96.9
1815 Male, age 53, unknown 96.7
1816 Male, age 51, unknown 96.0
2667 Female, age 75, unknown 92.2
2224 Female, age 72, unknown 91.8
2825 Male, age 18, unknown 83.4
2316 Male, age 76, right hemisphere 81.7
2407 Male, age 75, both hemispheres 81.0
Red nucleus
nTPM: 89.7
1821 Female, age 72, unknown 102.3
1865 Male, age 51, unknown 93.9
1954 Female, age 42, unknown 93.3
2785 Male, age 18, unknown 93.0
1904 Male, age 53, unknown 92.0
2725 Female, age 75, unknown 90.3
2227 Male, age 72, unknown 88.4
2769 Male, age 72, unknown 88.2
2503 Female, age 72, unknown 87.9
2823 Male, age 76, right hemisphere 87.1
2584 Male, age 75, left hemisphere 81.6
2588 Male, age 74, left hemisphere 78.5
Substantia nigra
nTPM: 92.1
1941 Male, age 53, unknown 100.9
1889 Female, age 72, unknown 98.9
2241 Male, age 72, unknown 97.2
1851 Male, age 51, unknown 95.2
2409 Female, age 72, unknown 95.2
1916 Female, age 42, unknown 94.1
2590 Female, age 75, unknown 87.0
2583 Male, age 75, right hemisphere 85.5
2665 Male, age 74, both hemispheres 83.6
2699 Male, age 18, unknown 83.1
Superior colliculus
nTPM: 88.5
2668 Female, age 75, unknown 93.0
2587 Male, age 74, left hemisphere 92.9
1895 Male, age 76, right hemisphere 92.1
2087 Female, age 72, unknown 90.5
1913 Female, age 42, unknown 90.0
2261 Male, age 18, unknown 89.1
1995 Male, age 72, unknown 88.2
1796 Male, age 53, unknown 85.0
1839 Male, age 51, unknown 84.7
2664 Male, age 75, both hemispheres 79.5
Ventral tegmental area
nTPM: 90.1
2410 Female, age 72, unknown 95.8
2218 Male, age 76, both hemispheres 91.1
2223 Female, age 72, unknown 90.4
1915 Female, age 42, unknown 89.9
1942 Male, age 51, unknown 87.6
2021 Male, age 53, unknown 85.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 93.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 93.1
Samples: 139

Max nTPM: 222.1
Min nTPM: 47.7
Std nTPM: 25.8
Median nTPM: 89.3
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 222.1
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 184.7
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 153.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 152.4
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 150.0
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 143.5
GTEX-RU72-0011-R2A-SM-2TF6O 50-59 years, female 138.6
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 136.6
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 134.0
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 133.4
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 128.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 320.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 320.0
FF:10158-103A5 76 years, female 320.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 60.4
Pig sample Sample description nTPM
Midbrain
nTPM: 55.5
Samples: 4

Max nTPM: 73.0
Min nTPM: 48.2
Sample A Female 48.2
Sample B Female 51.9
Sample C Male 73.0
Sample D Male 48.9
Periaqueductal gray
nTPM: 43.6
Samples: 3

Max nTPM: 56.0
Min nTPM: 37.3
Sample B Female 37.3
Sample C Male 56.0
Sample D Male 37.5
Substantia nigra
nTPM: 59.9
Samples: 4

Max nTPM: 78.5
Min nTPM: 33.9
Sample A Female 78.5
Sample B Female 52.1
Sample C Male 75.0
Sample D Male 33.9
Superior colliculi
nTPM: 60.4
Samples: 4

Max nTPM: 72.7
Min nTPM: 50.0
Sample A Female 59.0
Sample B Female 60.0
Sample C Male 72.7
Sample D Male 50.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 149.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 149.6
Samples: 4

Max nTPM: 153.0
Min nTPM: 146.0
Sample A Male 150.5
Sample B Male 149.0
Sample C Female 146.0
Sample D Female 153.0

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 11.0
512774 Antisense, RP_040809_02_E02, Mouse strain C57BL/6J (56 days, male) 11.2
75651232 Antisense, RP_060518_01_D10, Mouse strain C57BL/6J (56 days, male) 10.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.