ABOUTMENU
HELP
NEWS
MANF
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:34.8 nTPM
HPA:34.8 nTPM
GTEx:19.3 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:39.0 nTPM
Mouse:61.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011175
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
1898 Male, age 80, left hemisphere 36.7
2621 Female, age 67, right hemisphere 35.5
1855 Male, age 76, left hemisphere 34.5
2529 Female, age 94, left hemisphere 34.3
1911 Female, age 85, right hemisphere 33.5
2148 Female, age 91, left hemisphere 32.4
Dentate gyrus
nTPM: 34.0
2010 Male, age 76, both hemispheres 37.7
2246 Female, age 85, both hemispheres 34.4
2530 Female, age 94, left hemisphere 33.9
1927 Female, age 91, both hemispheres 33.4
2531 Female, age 67, both hemispheres 32.9
2528 Male, age 74, both hemispheres 31.5
Entorhinal gyrus
nTPM: 31.8
2117 Female, age 91, right hemisphere 33.8
1938 Female, age 85, left hemisphere 33.3
1787 Male, age 76, left hemisphere 33.1
2764 Male, age 80, right hemisphere 31.3
2686 Male, age 75, right hemisphere 30.2
2613 Female, age 94, left hemisphere 29.3
Hippocampus, CA1
nTPM: 34.8
1873 Female, age 85, both hemispheres 37.0
2045 Male, age 76, both hemispheres 36.4
2749 Male, age 80, left hemisphere 35.4
2527 Male, age 74, both hemispheres 33.9
2082 Female, age 91, right hemisphere 31.6
Hippocampus, CA2
nTPM: 33.6
1892 Male, age 76, both hemispheres 35.4
2249 Male, age 74, both hemispheres 34.9
1963 Male, age 80, left hemisphere 33.8
2437 Female, age 94, left hemisphere 33.3
1940 Female, age 85, left hemisphere 32.2
2113 Female, age 91, right hemisphere 32.0
Hippocampus, CA3
nTPM: 34.3
1867 Male, age 76, both hemispheres 36.8
2436 Male, age 74, both hemispheres 36.8
1891 Female, age 85, both hemispheres 34.3
2620 Female, age 94, left hemisphere 33.3
2861 Female, age 67, both hemispheres 33.0
2137 Male, age 80, left hemisphere 32.0
Parahippocampal cortex
nTPM: 32.3
2018 Male, age 76, both hemispheres 34.6
2250 Female, age 67, right hemisphere 33.2
1933 Female, age 85, both hemispheres 33.1
2245 Female, age 91, both hemispheres 32.9
1850 Male, age 80, both hemispheres 32.3
1990 Female, age 91, right hemisphere 32.2
2532 Female, age 72, left hemisphere 32.2
2692 Male, age 74, both hemispheres 31.7
2693 Female, age 94, both hemispheres 30.7
2622 Female, age 67, right hemisphere 30.3
Perirhinal gyrus
nTPM: 32.8
1841 Female, age 85, right hemisphere 33.5
1847 Female, age 91, left hemisphere 33.3
2848 Male, age 76, right hemisphere 33.2
2521 Female, age 94, right hemisphere 32.8
1794 Male, age 80, right hemisphere 31.2
Subiculum
nTPM: 33.5
2042 Male, age 76, both hemispheres 36.4
1977 Female, age 85, both hemispheres 34.4
2438 Female, age 94, left hemisphere 33.8
1901 Male, age 80, both hemispheres 32.9
2619 Male, age 74, both hemispheres 32.3
2729 Female, age 91, right hemisphere 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 71.3
Min nTPM: 7.2
Std nTPM: 9.2
Median nTPM: 16.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 71.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 70.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 50.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 49.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 44.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 43.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 43.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 41.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10153-102I9 76 years, female 33.3
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 47.3
Min nTPM: 34.5
Sample A Female 47.3
Sample B Female 37.9
Sample C Male 36.1
Sample D Male 34.5
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 43.3
Min nTPM: 29.0
Sample A Female 34.6
Sample B Female 43.3
Sample C Male 33.2
Sample D Male 29.0
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 41.6
Min nTPM: 25.9
Sample A Female 41.6
Sample B Female 28.2
Sample C Male 25.9
Sample D Male 27.2
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 40.3
Min nTPM: 24.2
Sample A Female 33.2
Sample B Female 24.2
Sample C Male 36.2
Sample D Male 40.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 68.5
Min nTPM: 47.8
Sample A Male 47.8
Sample B Male 55.9
Sample C Female 68.5
Sample D Female 64.3
Hippocampal formation
nTPM: 61.9
Samples: 4

Max nTPM: 72.1
Min nTPM: 53.0
Sample A Male 54.3
Sample B Male 53.0
Sample C Female 72.1
Sample D Female 68.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69114211 Antisense, RP_050317_01_C08, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.