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STXBP5L
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:4.5 nTPM
FANTOM5:123.0 Scaled Tags Per Million
Pig:94.8 nTPM
Mouse:22.4 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 6.6
2621 Female, age 67, right hemisphere 16.6
1911 Female, age 85, right hemisphere 14.9
2148 Female, age 91, left hemisphere 7.0
1898 Male, age 80, left hemisphere 1.1
1855 Male, age 76, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 7.0
1927 Female, age 91, both hemispheres 26.7
2531 Female, age 67, both hemispheres 15.7
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 6.9
2613 Female, age 94, left hemisphere 26.1
1938 Female, age 85, left hemisphere 8.2
2686 Male, age 75, right hemisphere 7.5
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 19.1
2749 Male, age 80, left hemisphere 80.5
1873 Female, age 85, both hemispheres 11.8
2527 Male, age 74, both hemispheres 3.3
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 4.1
1892 Male, age 76, both hemispheres 12.4
1963 Male, age 80, left hemisphere 11.5
2249 Male, age 74, both hemispheres 1.2
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 17.7
2137 Male, age 80, left hemisphere 63.4
2620 Female, age 94, left hemisphere 20.8
1867 Male, age 76, both hemispheres 14.3
2861 Female, age 67, both hemispheres 7.6
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 4.0
2245 Female, age 91, both hemispheres 16.2
1850 Male, age 80, both hemispheres 8.1
2693 Female, age 94, both hemispheres 6.6
1990 Female, age 91, right hemisphere 5.2
2250 Female, age 67, right hemisphere 2.0
2532 Female, age 72, left hemisphere 1.4
1933 Female, age 85, both hemispheres 0.8
2018 Male, age 76, both hemispheres 0.0
2622 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 7.4
1847 Female, age 91, left hemisphere 21.7
2521 Female, age 94, right hemisphere 9.4
1841 Female, age 85, right hemisphere 4.1
2848 Male, age 76, right hemisphere 1.0
1794 Male, age 80, right hemisphere 0.8
Subiculum
nTPM: 3.3
1901 Male, age 80, both hemispheres 20.1
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.5
Samples: 197

Max nTPM: 14.7
Min nTPM: 0.1
Std nTPM: 2.9
Median nTPM: 3.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 14.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 13.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 11.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 11.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 10.9
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 10.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 10.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 9.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 9.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 9.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.0
FF:10169-103B7 60 years, female 163.2
FF:10153-102I9 76 years, female 82.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.8
Samples: 4

Max nTPM: 130.1
Min nTPM: 65.4
Sample A Female 80.4
Sample B Female 103.4
Sample C Male 65.4
Sample D Male 130.1
Entorhinal cortex
nTPM: 42.7
Samples: 4

Max nTPM: 47.8
Min nTPM: 39.5
Sample A Female 39.5
Sample B Female 47.8
Sample C Male 39.5
Sample D Male 43.9
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 36.5
Min nTPM: 27.7
Sample A Female 36.5
Sample B Female 30.6
Sample C Male 32.6
Sample D Male 27.7
Ventral hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 83.2
Min nTPM: 24.0
Sample A Female 33.1
Sample B Female 64.8
Sample C Male 24.0
Sample D Male 83.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 24.3
Min nTPM: 18.5
Sample A Male 18.5
Sample B Male 20.0
Sample C Female 19.4
Sample D Female 24.3
Hippocampal formation
nTPM: 22.4
Samples: 4

Max nTPM: 28.0
Min nTPM: 18.0
Sample A Male 18.7
Sample B Male 24.8
Sample C Female 28.0
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
69887433 Antisense, RP_050512_03_F10, Mouse strain C57BL/6J (56 days, male) 10.2

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The Human Protein Atlas

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