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PNRC1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:58.3 nTPM
HPA:58.3 nTPM
GTEx:47.8 nTPM
FANTOM5:553.0 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:31.6 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029839
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.3
Sample id Sample description nTPM
Hippocampus
nTPM: 57.7
2529 Female, age 94, left hemisphere 64.7
2621 Female, age 67, right hemisphere 58.9
1898 Male, age 80, left hemisphere 58.4
1911 Female, age 85, right hemisphere 56.7
2148 Female, age 91, left hemisphere 55.4
1855 Male, age 76, left hemisphere 51.9
Dentate gyrus
nTPM: 57.7
2010 Male, age 76, both hemispheres 65.2
2531 Female, age 67, both hemispheres 63.0
2528 Male, age 74, both hemispheres 62.3
2246 Female, age 85, both hemispheres 61.8
2530 Female, age 94, left hemisphere 49.2
1927 Female, age 91, both hemispheres 44.8
Entorhinal gyrus
nTPM: 49.7
1787 Male, age 76, left hemisphere 62.2
2117 Female, age 91, right hemisphere 56.8
1938 Female, age 85, left hemisphere 53.2
2764 Male, age 80, right hemisphere 50.6
2686 Male, age 75, right hemisphere 40.3
2613 Female, age 94, left hemisphere 34.9
Hippocampus, CA1
nTPM: 56.8
1873 Female, age 85, both hemispheres 63.2
2527 Male, age 74, both hemispheres 62.1
2045 Male, age 76, both hemispheres 57.7
2082 Female, age 91, right hemisphere 54.0
2749 Male, age 80, left hemisphere 47.0
Hippocampus, CA2
nTPM: 52.5
1940 Female, age 85, left hemisphere 59.7
2249 Male, age 74, both hemispheres 59.1
2113 Female, age 91, right hemisphere 58.7
1963 Male, age 80, left hemisphere 52.1
2437 Female, age 94, left hemisphere 43.0
1892 Male, age 76, both hemispheres 42.2
Hippocampus, CA3
nTPM: 52.2
2861 Female, age 67, both hemispheres 60.7
1891 Female, age 85, both hemispheres 58.0
2620 Female, age 94, left hemisphere 54.0
2436 Male, age 74, both hemispheres 49.0
1867 Male, age 76, both hemispheres 47.8
2137 Male, age 80, left hemisphere 43.9
Parahippocampal cortex
nTPM: 50.5
2018 Male, age 76, both hemispheres 59.2
1990 Female, age 91, right hemisphere 56.3
2250 Female, age 67, right hemisphere 53.9
1933 Female, age 85, both hemispheres 52.5
2245 Female, age 91, both hemispheres 51.4
1850 Male, age 80, both hemispheres 51.3
2532 Female, age 72, left hemisphere 51.1
2622 Female, age 67, right hemisphere 45.4
2693 Female, age 94, both hemispheres 42.3
2692 Male, age 74, both hemispheres 41.5
Perirhinal gyrus
nTPM: 58.3
1841 Female, age 85, right hemisphere 68.0
1794 Male, age 80, right hemisphere 59.0
1847 Female, age 91, left hemisphere 56.1
2521 Female, age 94, right hemisphere 55.7
2848 Male, age 76, right hemisphere 52.9
Subiculum
nTPM: 52.6
1977 Female, age 85, both hemispheres 60.3
2619 Male, age 74, both hemispheres 59.5
2729 Female, age 91, right hemisphere 57.4
2042 Male, age 76, both hemispheres 50.6
1901 Male, age 80, both hemispheres 45.1
2438 Female, age 94, left hemisphere 42.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.8
Samples: 197

Max nTPM: 126.1
Min nTPM: 26.3
Std nTPM: 15.8
Median nTPM: 45.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 126.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 119.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 100.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 91.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 89.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 88.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 82.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 79.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 79.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 75.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 74.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 553.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 553.0
FF:10169-103B7 60 years, female 579.6
FF:10153-102I9 76 years, female 526.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 65.5
Samples: 4

Max nTPM: 79.4
Min nTPM: 53.3
Sample A Female 79.4
Sample B Female 65.6
Sample C Male 63.5
Sample D Male 53.3
Entorhinal cortex
nTPM: 54.0
Samples: 4

Max nTPM: 61.0
Min nTPM: 43.4
Sample A Female 55.0
Sample B Female 61.0
Sample C Male 56.7
Sample D Male 43.4
Subiculum
nTPM: 61.9
Samples: 4

Max nTPM: 71.5
Min nTPM: 57.3
Sample A Female 71.5
Sample B Female 59.6
Sample C Male 57.3
Sample D Male 59.1
Ventral hippocampus
nTPM: 62.8
Samples: 4

Max nTPM: 67.8
Min nTPM: 56.1
Sample A Female 59.5
Sample B Female 56.1
Sample C Male 67.8
Sample D Male 67.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 33.4
Min nTPM: 27.2
Sample A Male 32.9
Sample B Male 33.4
Sample C Female 27.2
Sample D Female 32.8
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 30.7
Min nTPM: 26.7
Sample A Male 28.2
Sample B Male 30.7
Sample C Female 29.9
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
2502 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 4.2
2501 Antisense, RP_Baylor_103331, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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